RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SEL1L2Q5TEA6 688 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 TRIM74Q86UV6 250 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 TRIM73Q86UV7 250 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 EXOC3L1Q86VI1 746 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 PALB2Q86YC2 1186 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 EZH1Q92800 747 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-206ENST00000397163 IFT74Q96LB3 600 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 EPAS1Q99814 870 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 LMCD1Q9NZU5 365 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 MYH14Q7Z406 1995 aaKnown RBP9.85□□□□□ -0.83
CAPN3-206ENST00000397163 RTN3O95197 1032 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-206ENST00000397163 RARGP13631 454 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 PCK1P35558 622 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 FMO5P49326 533 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 ZNF131P52739 623 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 COPS2P61201 443 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 NFIXQ14938 502 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 LONRF1Q17RB8 773 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 RNF220Q5VTB9 566 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 TTC27Q6P3X3 843 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 FAM47EQ6ZV65 393 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 TEKT4Q8WW24 435 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 ARHGEF2Q92974 986 aaKnown RBP9.85□□□□□ -0.83
CAPN3-206ENST00000397163 RUNDC3BQ96NL0 473 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 RUSC1Q9BVN2 902 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 ATF5Q9Y2D1 282 aaPredicted RBP9.85□□□□□ -0.83
CAPN3-206ENST00000397163 C2CD2Q9Y426 696 aa9.85□□□□□ -0.83
CAPN3-206ENST00000397163 TMEM120BA0PK00 339 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 SLC26A4O43511 780 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 KCNQ2O43526 872 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 FAM13AO94988 1023 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 ACSL3O95573 720 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 FESP07332 822 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 TRIM49P0CI25 452 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 TRIM49CP0CI26 452 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CCND1P24385 295 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 RHBDL3P58872 404 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MESDQ14696 234 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 LONP2Q86WA8 852 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 RHOT2Q8IXI1 618 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 GBP7Q8N8V2 638 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CNBD1Q8NA66 436 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 OLIG1Q8TAK6 271 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 NAF1Q96HR8 494 aaKnown RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 TMEM109Q9BVC6 243 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 NKX1-2Q9UD57 310 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MAST2Q6P0Q8 1798 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MIF4GDA9UHW6 222 aaKnown RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 TGFB1I1O43294 461 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 AHCYL1O43865 530 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 SPATA31C1P0DKV0 1188 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 RPA1P27694 616 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 TM4SF1P30408 202 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 KCNJ1P48048 391 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CYP2J2P51589 502 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 LACTBP83111 547 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CALCOCO2Q13137 446 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 BMT2Q1RMZ1 405 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 SLC5A9Q2M3M2 681 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 GDAP1Q8TB36 358 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 INTS2Q9H0H0 1204 aaKnown RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 USP40Q9NVE5 1235 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 ADAM22Q9P0K1 906 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CHORDC1Q9UHD1 332 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 PCYOX1Q9UHG3 505 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MTUS1Q9ULD2 1270 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 PCDHA1Q9Y5I3 950 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 ANKRD63C9JTQ0 380 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 FTLP02792 175 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CREB1P16220 341 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 NMT1P30419 496 aaKnown RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 SCNN1BP51168 640 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MKRN4PQ13434 485 aaPredicted RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 LLGL1Q15334 1064 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CBWD6Q4V339 395 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CBWD3Q5JTY5 395 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 CBWD5Q5RIA9 395 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MFSD14BQ5SR56 506 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 GPATCH4Q5T3I0 446 aaKnown RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 SPATA21Q7Z572 469 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MYCT1Q8N699 235 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 ZSWIM1Q9BR11 485 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 DDX23Q9BUQ8 820 aaKnown RBP9.84□□□□□ -0.83
CAPN3-206ENST00000397163 BRWD3Q6RI45 1802 aa9.84□□□□□ -0.83
CAPN3-206ENST00000397163 MYO3BQ8WXR4 1341 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 PASKQ96RG2 1323 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 A6NHS1 94 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 FOXO6A8MYZ6 492 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ARHGAP4P98171 946 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ATP11AP98196 1134 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 BNIP1Q12981 228 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 QRICH1Q2TAL8 776 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ZC2HC1CQ53FD0 456 aaPredicted RBP9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ZDHHC14Q8IZN3 488 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 RPS6KC1Q96S38 1066 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 AGPAT1Q99943 283 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 SYT15Q9BQS2 421 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 CD209Q9NNX6 404 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 APEX2Q9UBZ4 518 aa9.83□□□□□ -0.84
CAPN3-206ENST00000397163 ARL2BPQ9Y2Y0 163 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms