RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 XXYLT1Q8NBI6 393 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 IL17RAQ96F46 866 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 TRIM8Q9BZR9 551 aa14.79□□□□□ -0.04
COL4A3-202ENST00000396578 AKAP10O43572 662 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 CCDC142Q17RM4 750 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 COG1Q8WTW3 980 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 BTN2A2Q8WVV5 523 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 NDFIP2Q9NV92 336 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 GDAQ9Y2T3 454 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 CSPG5O95196 566 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 CYLC2Q14093 348 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 STAT4Q14765 748 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 ARHGEF6Q15052 776 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 CDKL3Q8IVW4 592 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 PIGOQ8TEQ8 1089 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 NPHS2Q9NP85 383 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 PI4KBQ9UBF8 816 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 UBA6A0AVT1 1052 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 MEFVO15553 781 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 IMPDH2P12268 514 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 KHDRBS2Q5VWX1 349 aaKnown RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 ELMOD1Q8N336 334 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 C10orf88Q9H8K7 445 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 FAM32AQ9Y421 112 aaKnown RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 F5H423 210 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 NEMP1O14524 444 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 PRCPP42785 496 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 PTPRTO14522 1441 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 PYGMP11217 842 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 HOXA13P31271 388 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 RNF25Q96BH1 459 aaPredicted RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 MRGBPQ9NV56 204 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 SMG5Q9UPR3 1016 aaKnown RBP14.78□□□□□ -0.04
COL4A3-202ENST00000396578 GDF11O95390 407 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 ARSEP51690 589 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 TMEM154Q6P9G4 183 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 PARVAQ9NVD7 372 aa14.78□□□□□ -0.04
COL4A3-202ENST00000396578 FTLP02792 175 aaPredicted RBP14.77□□□□□ -0.04
COL4A3-202ENST00000396578 PHKG2P15735 406 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 SDC4P31431 198 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 ZNF211Q13398 564 aaPredicted RBP14.77□□□□□ -0.04
COL4A3-202ENST00000396578 SYDE1Q6ZW31 735 aaPredicted RBP14.77□□□□□ -0.04
COL4A3-202ENST00000396578 FAM160B2Q86V87 743 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 LONP2Q86WA8 852 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 CNKSR1Q969H4 720 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 CMTM5Q96DZ9 223 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 TSSK1BQ9BXA7 367 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 GID8Q9NWU2 228 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 HDAC6Q9UBN7 1215 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 FBXL5Q9UKA1 691 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 LOC102724159A0A0B4J2E5 919 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 FGFR4P22455 802 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 GPC3P51654 580 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 PWP2Q15269 919 aaKnown RBP14.77□□□□□ -0.04
COL4A3-202ENST00000396578 IZUMO3Q5VZ72 239 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 TMA16Q96EY4 203 aaKnown RBP14.77□□□□□ -0.04
COL4A3-202ENST00000396578 TSPY1Q01534 308 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 STXBP2Q15833 593 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 MDH1BQ5I0G3 518 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 MCPH1Q8NEM0 835 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 OR6P1Q8NGX9 317 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 DTX3LQ8TDB6 740 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 BFARQ9NZS9 450 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 STAP1Q9ULZ2 295 aa14.77□□□□□ -0.04
COL4A3-202ENST00000396578 ESYT3A0FGR9 886 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 APOL1O14791 398 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 HUS1O60921 280 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 RAB14P61106 215 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 AGGF1Q8N302 714 aaeCLIP14.77□□□□□ -0.05
COL4A3-202ENST00000396578 SCFD1Q8WVM8 642 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 DDX47Q9H0S4 455 aaKnown RBP14.77□□□□□ -0.05
COL4A3-202ENST00000396578 CLRN2A0PK11 232 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 VAMP7P51809 220 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 KRT17Q04695 432 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 ANO4Q32M45 955 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 SUPT20HL1Q3ZLR7 823 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 MFN1Q8IWA4 741 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 LCORLQ8N3X6 602 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 ZNF507Q8TCN5 953 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 GCLMP48507 274 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 OSBPL5Q9H0X9 879 aaPredicted RBP14.77□□□□□ -0.05
COL4A3-202ENST00000396578 CCDC134Q9H6E4 229 aa14.77□□□□□ -0.05
COL4A3-202ENST00000396578 TOPORSQ9NS56 1045 aaPredicted RBP14.77□□□□□ -0.05
COL4A3-202ENST00000396578 H0YC42 278 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 NT5C2P49902 561 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 LRRC36Q1X8D7 754 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 LUZP2Q86TE4 346 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 TRIM49BA6NDI0 452 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 EFHC2Q5JST6 749 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 ANKS3Q6ZW76 656 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 SH3KBP1Q96B97 665 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 POLE3Q9NRF9 147 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 NNMTP40261 264 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 MDH1P40925 334 aaKnown RBP14.76□□□□□ -0.05
COL4A3-202ENST00000396578 MAPK6Q16659 721 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 RHPN2Q8IUC4 686 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 NUP93Q8N1F7 819 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 RAB42Q8N4Z0 105 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 AFG1LQ8WV93 481 aa14.76□□□□□ -0.05
COL4A3-202ENST00000396578 CEP95Q96GE4 821 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms