RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 SLC7A3Q8WY07 619 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 KCNN1Q92952 543 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 MFSD14AQ96MC6 490 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 PORCNQ9H237 461 aa16.2■□□□□ 0.18
CBX3-202ENST00000396386 GSTTP1A0A1W2PQM5 241 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 GGPS1O95749 300 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 NAMPTP43490 491 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 LIG4P49917 911 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 MAP2K1Q02750 393 aaPredicted RBP16.19■□□□□ 0.18
CBX3-202ENST00000396386 STRN3Q13033 797 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 MOGSQ13724 837 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 METTL7BQ6UX53 244 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 AFAP1L1Q8TED9 768 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 TMEM143Q96AN5 459 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 CCDC127Q96BQ5 260 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 PLXNB2O15031 1838 aa16.19■□□□□ 0.18
CBX3-202ENST00000396386 FOXN3O00409 490 aaPredicted RBP16.18■□□□□ 0.18
CBX3-202ENST00000396386 SASH3O75995 380 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 TMEM253P0C7T8 217 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 TNFAIP3P21580 790 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 KCTD2Q14681 263 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 CFAP221Q4G0U5 840 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 BEND6Q5SZJ8 279 aaPredicted RBP16.18■□□□□ 0.18
CBX3-202ENST00000396386 SPATA4Q8NEY3 305 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 DEPTORQ8TB45 409 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 ASAP3Q8TDY4 903 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 PCYT2Q99447 389 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 MMP19Q99542 508 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 FUT8Q9BYC5 575 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 TXNRD2Q9NNW7 524 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 ZNFX1Q9P2E3 1918 aaKnown RBP16.18■□□□□ 0.18
CBX3-202ENST00000396386 KIAA0391O15091 583 aaKnown RBP16.18■□□□□ 0.18
CBX3-202ENST00000396386 GLRA2P23416 452 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 ARL2P36404 184 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 GALCP54803 685 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 GPR162Q16538 588 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 KCNV1Q6PIU1 500 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 DNAAF5Q86Y56 855 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 LRRC57Q8N9N7 239 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 TPCN2Q8NHX9 752 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 LMBR1Q8WVP7 490 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 CTNNBL1Q8WYA6 563 aaPredicted RBP16.18■□□□□ 0.18
CBX3-202ENST00000396386 RUBCNQ92622 972 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 TAF4BQ92750 862 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 FAM167AQ96KS9 214 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 FGD4Q96M96 766 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 CEP89Q96ST8 783 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 AGPAT1Q99943 283 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 KIAA1586Q9HCI6 787 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 NRBP2Q9NSY0 501 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 SEPT11Q9NVA2 429 aaKnown RBP16.18■□□□□ 0.18
CBX3-202ENST00000396386 RBPJLQ9UBG7 517 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 PPME1Q9Y570 386 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 MCM3APO60318 1980 aa16.18■□□□□ 0.18
CBX3-202ENST00000396386 LRRIQ4A6NIV6 560 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 CES2O00748 559 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 EXTL3O43909 919 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 PGK2P07205 417 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 TCF7P36402 384 aaPredicted RBP16.17■□□□□ 0.18
CBX3-202ENST00000396386 PLA2G4AP47712 749 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 GPC3P51654 580 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 STAT5BP51692 787 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 MFAP3P55082 362 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 TARBP2Q15633 366 aaKnown RBP16.17■□□□□ 0.18
CBX3-202ENST00000396386 MAP9Q49MG5 647 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 SYCE1Q8N0S2 351 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 FBXL13Q8NEE6 735 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 SEPT1Q8WYJ6 367 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 RFFLQ8WZ73 363 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 NT5C1BQ96P26 610 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 FAM213AQ9BRX8 229 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 TOPORSQ9NS56 1045 aaPredicted RBP16.17■□□□□ 0.18
CBX3-202ENST00000396386 PLXNA1Q9UIW2 1896 aa16.17■□□□□ 0.18
CBX3-202ENST00000396386 ZC3H4Q9UPT8 1303 aaKnown RBP16.17■□□□□ 0.18
CBX3-202ENST00000396386 DNAJC25-GNG10A0A024R161 153 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 ZNF233A6NK53 670 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 KIF4AO95239 1232 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 PIGRP01833 764 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 DNA2P51530 1060 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 RPS6KA1Q15418 735 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 EAPPQ56P03 285 aaPredicted RBP16.16■□□□□ 0.18
CBX3-202ENST00000396386 GPAT2Q6NUI2 795 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 EEPD1Q7L9B9 569 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 HDXQ7Z353 690 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 PPM1KQ8N3J5 372 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 SEMA4DQ92854 862 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 R3HDMLQ9H3Y0 253 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 MROH8Q9H579 483 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 AZI2Q9H6S1 392 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 SMARCAL1Q9NZC9 954 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 EHD2Q9NZN4 543 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 PACSIN2Q9UNF0 486 aaPredicted RBP16.16■□□□□ 0.18
CBX3-202ENST00000396386 TMCO5BA8MYB1 307 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 TULP1O00294 542 aaPredicted RBP16.16■□□□□ 0.18
CBX3-202ENST00000396386 SNAPC2Q13487 334 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 LY6KQ17RY6 165 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 SLC20A1Q8WUM9 679 aa16.16■□□□□ 0.18
CBX3-202ENST00000396386 STYXL1Q9Y6J8 313 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms