RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 KRT23Q9C075 422 aa9□□□□□ -0.97
NDE1-202ENST00000396355 DDX28Q9NUL7 540 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 GRIN2DO15399 1336 aa9□□□□□ -0.97
NDE1-202ENST00000396355 ZNF541Q9H0D2 1346 aa9□□□□□ -0.97
NDE1-202ENST00000396355 CYP2D7A0A087X1C5 515 aa9□□□□□ -0.97
NDE1-202ENST00000396355 PSMA7O14818 248 aa9□□□□□ -0.97
NDE1-202ENST00000396355 XPO1O14980 1071 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 AOC2O75106 756 aa9□□□□□ -0.97
NDE1-202ENST00000396355 NTSR2O95665 410 aa9□□□□□ -0.97
NDE1-202ENST00000396355 MKRN3Q13064 507 aaKnown RBP9□□□□□ -0.97
NDE1-202ENST00000396355 XRCC4Q13426 336 aa9□□□□□ -0.97
NDE1-202ENST00000396355 MDH1BQ5I0G3 518 aa9□□□□□ -0.97
NDE1-202ENST00000396355 IYDQ6PHW0 289 aa9□□□□□ -0.97
NDE1-202ENST00000396355 CRELD2Q6UXH1 353 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 TMC4Q7Z404 712 aa9□□□□□ -0.97
NDE1-202ENST00000396355 CRACR2BQ8N4Y2 399 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 ZNF713Q8N859 430 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 DCUN1D5Q9BTE7 237 aa9□□□□□ -0.97
NDE1-202ENST00000396355 NHEJ1Q9H9Q4 299 aaPredicted RBP9□□□□□ -0.97
NDE1-202ENST00000396355 CABP5Q9NP86 173 aa9□□□□□ -0.97
NDE1-202ENST00000396355 SLC5A4Q9NY91 659 aa9□□□□□ -0.97
NDE1-202ENST00000396355 TMCO1Q9UM00 188 aa9□□□□□ -0.97
NDE1-202ENST00000396355 ATP11BQ9Y2G3 1177 aa9□□□□□ -0.97
NDE1-202ENST00000396355 PTPN22Q9Y2R2 807 aa9□□□□□ -0.97
NDE1-202ENST00000396355 MGRN1O60291 552 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ESRRAP11474 423 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 PTPREP23469 700 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 MCM7P33993 719 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 GFPT1Q06210 699 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 PAK1Q13153 545 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 BIRC3Q13489 604 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 RASA3Q14644 834 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 SEC23AQ15436 765 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 KYNUQ16719 465 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 MMEL1Q495T6 779 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 RGS9BPQ6ZS82 235 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CSGALNACT2Q8N6G5 542 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CCDC127Q96BQ5 260 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 LENG1Q96BZ8 264 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 CCDC77Q9BR77 488 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 HOMER2Q9NSB8 354 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 TRIM17Q9Y577 477 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ZNF233A6NK53 670 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PDE2AO00408 941 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 HOXD11P31277 338 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 TUBP50607 506 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PDE1BQ01064 536 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CHRNDQ07001 517 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 TAF12Q16514 161 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 RTN1Q16799 776 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 VWA3BQ502W6 1294 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ANO7Q6IWH7 933 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 UBE2Q1Q7Z7E8 422 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 GALNT4Q8N4A0 578 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PDZD8Q8NEN9 1154 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PAIP1Q9H074 479 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 TELO2Q9Y4R8 837 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 TTC26A0AVF1 554 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 RASGRF2O14827 1237 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ADAMTS3O15072 1205 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 SHOX2O60902 331 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 ZNF18P17022 549 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 SARSP49591 514 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 GMPSP49915 693 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 EPHB1P54762 984 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 WTAPQ15007 396 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PKN1Q16512 942 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 SLC9C1Q4G0N8 1177 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 NT5DC1Q5TFE4 455 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 NEK10Q6ZWH5 1172 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ZNF654Q8IZM8 581 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CYP4X1Q8N118 509 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 TTC8Q8TAM2 541 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 GIPC3Q8TF64 312 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CEP44Q9C0F1 390 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ASCC2Q9H1I8 757 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 CUEDC2Q9H467 287 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 WDR37Q9Y2I8 494 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PRDM1O75626 825 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 GLI1P08151 1106 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CALB2P22676 271 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 EPHB2P29323 1055 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 MRPS15P82914 257 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 FUT2Q10981 343 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 MORC3Q14149 939 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 DOK7Q18PE1 504 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 HP1BP3Q5SSJ5 553 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 CCSAPQ6IQ19 270 aaPredicted RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 IZUMO2Q6UXV1 221 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 PATL1Q86TB9 770 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 CAPSLQ8WWF8 208 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 HDAC2Q92769 488 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 TGS1Q96RS0 853 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 SH3GL2Q99962 352 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CORO1BQ9BR76 489 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CNNM2Q9H8M5 875 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 DBNDD1Q9H9R9 158 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 ADARB2Q9NS39 739 aaKnown RBP8.99□□□□□ -0.97
NDE1-202ENST00000396355 NDE1Q9NXR1 346 aa8.99□□□□□ -0.97
NDE1-202ENST00000396355 CNOT7Q9UIV1 285 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms