RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 C2CD2LO14523 706 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 TSPAN1O60635 241 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 USO1O60763 962 aaKnown RBP18.16■□□□□ 0.5
DDR1-229ENST00000396342 CTDNEP1O95476 244 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 SOD2P04179 222 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 HOXA11P31270 313 aaPredicted RBP18.16■□□□□ 0.5
DDR1-229ENST00000396342 MCM7P33993 719 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 MRE11P49959 708 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 NUBP1P53384 320 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 ORC2Q13416 577 aaPredicted RBP18.16■□□□□ 0.5
DDR1-229ENST00000396342 PTPN14Q15678 1187 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 SLC27A1Q6PCB7 646 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 TMC5Q6UXY8 1006 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 C8orf76Q96K31 380 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 HSD17B14Q9BPX1 270 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 ADPGKQ9BRR6 497 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 RAB34Q9BZG1 259 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 POLR3FQ9H1D9 316 aaPredicted RBP18.16■□□□□ 0.5
DDR1-229ENST00000396342 C2orf40Q9H1Z8 148 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 MINDY3Q9H8M7 445 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 TUFT1Q9NNX1 390 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 PARP2Q9UGN5 583 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 LIMCH1Q9UPQ0 1083 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 STK24Q9Y6E0 443 aa18.16■□□□□ 0.5
DDR1-229ENST00000396342 ARHGEF35A5YM69 484 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 ARL5CA6NH57 179 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 EPCAMP16422 314 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 RFX1P22670 979 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 MLH1P40692 756 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 GLUD2P49448 558 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 SPIRE1Q08AE8 756 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 PPP2R5AQ15172 486 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 HAUS3Q68CZ6 603 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 CYP26C1Q6V0L0 522 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 ZDHHC14Q8IZN3 488 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 C12orf76Q8N812 135 aaPredicted RBP18.15■□□□□ 0.5
DDR1-229ENST00000396342 NSUN7Q8NE18 718 aaKnown RBP18.15■□□□□ 0.5
DDR1-229ENST00000396342 PIGOQ8TEQ8 1089 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 CPB2Q96IY4 423 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 KLHL5Q96PQ7 755 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 GAD1Q99259 594 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 NFKBIZQ9BYH8 718 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 PIDD1Q9HB75 910 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.15■□□□□ 0.5
DDR1-229ENST00000396342 PRMT7Q9NVM4 692 aaPredicted RBP18.15■□□□□ 0.5
DDR1-229ENST00000396342 KIF3AQ9Y496 699 aa18.15■□□□□ 0.5
DDR1-229ENST00000396342 FNDC1Q4ZHG4 1894 aaPredicted RBP18.14■□□□□ 0.49
DDR1-229ENST00000396342 MEIS3P2A8K0S8 358 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 C2CD4DB7Z1M9 353 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 TADA2AO75478 443 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 DDHD2O94830 711 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 GLUD1P00367 558 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 FDPSP14324 419 aaKnown RBP18.14■□□□□ 0.49
DDR1-229ENST00000396342 RARRES1P49788 294 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 HMGN5P82970 282 aaKnown RBP18.14■□□□□ 0.49
DDR1-229ENST00000396342 UBXN11Q5T124 520 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 MAEAQ7L5Y9 396 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 TMEM173Q86WV6 379 aaPredicted RBP18.14■□□□□ 0.49
DDR1-229ENST00000396342 IFNLR1Q8IU57 520 aaPredicted RBP18.14■□□□□ 0.49
DDR1-229ENST00000396342 DEPTORQ8TB45 409 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 IFT74Q96LB3 600 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 PRIMPOLQ96LW4 560 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 ZSCAN31Q96LW9 406 aaPredicted RBP18.14■□□□□ 0.49
DDR1-229ENST00000396342 HERC2P3Q9BVR0 1158 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 LIMD1Q9UGP4 676 aa18.14■□□□□ 0.49
DDR1-229ENST00000396342 FAM205CA6NFA0 338 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 ZBTB39O15060 712 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 NPTXRO95502 500 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 CNPP09543 421 aaKnown RBP18.13■□□□□ 0.49
DDR1-229ENST00000396342 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 ARL2P36404 184 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 RBM25P49756 843 aaKnown RBP18.13■□□□□ 0.49
DDR1-229ENST00000396342 SCNN1GP51170 649 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 MBTD1Q05BQ5 628 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 CAPSQ13938 189 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 USP41Q3LFD5 358 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 EARS2Q5JPH6 523 aaKnown RBP18.13■□□□□ 0.49
DDR1-229ENST00000396342 C15orf39Q6ZRI6 1047 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 GPR149Q86SP6 731 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 SLC22A17Q8WUG5 538 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 LLPHQ9BRT6 129 aaKnown RBP18.13■□□□□ 0.49
DDR1-229ENST00000396342 EIF2AQ9BY44 585 aaKnown RBP18.13■□□□□ 0.49
DDR1-229ENST00000396342 FBXL21Q9UKT6 434 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 LOXHD1Q8IVV2 1947 aa18.13■□□□□ 0.49
DDR1-229ENST00000396342 N4BP3O15049 544 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 ARF4P18085 180 aaPredicted RBP18.12■□□□□ 0.49
DDR1-229ENST00000396342 AVPR2P30518 371 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 CLCN4P51793 760 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 GRIK3Q13003 919 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 MAPK6Q16659 721 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 COLGALT2Q8IYK4 626 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 SMG8Q8ND04 991 aaKnown RBP18.12■□□□□ 0.49
DDR1-229ENST00000396342 TNFRSF25Q93038 417 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 XPNPEP1Q9NQW7 623 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 KIAA1671Q9BY89 1806 aa18.12■□□□□ 0.49
DDR1-229ENST00000396342 MUC6Q6W4X9 2439 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 POTEMA6NI47 508 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 JAK2O60674 1132 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 DTNBO60941 627 aa18.11■□□□□ 0.49
DDR1-229ENST00000396342 OR52Z1P0C646 297 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms