RNA–Protein interactions for RNA: ENST00000396033.6

ITGB1-202, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ITGB1, Length 3,784 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-202ENST00000396033 OSBPL9Q96SU4 736 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 FEZ2Q9UHY8 353 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 PNMA3Q9UL41 463 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 DNAJC25-GNG10A0A024R161 153 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 LRRIQ3A6PVS8 624 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 SOCS7O14512 581 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 CYP2C8P10632 490 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 TCP1P17987 556 aaKnown RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 RFC5P40937 340 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 USP37Q86T82 979 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 MSANTD4Q8NCY6 345 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 LNX1Q8TBB1 728 aaPredicted RBP13.16□□□□□ -0.3
ITGB1-202ENST00000396033 AFAP1L1Q8TED9 768 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 PARD3BQ8TEW8 1205 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 FBXL18Q96ME1 805 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.16□□□□□ -0.35e-7■■■■■ 145.3
ITGB1-202ENST00000396033 LCMT1Q9UIC8 334 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 NENFQ9UMX5 172 aa13.16□□□□□ -0.3
ITGB1-202ENST00000396033 BTNL10A8MVZ5 291 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 NOP56O00567 594 aaKnown RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 NAMPTP43490 491 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 KCNV1Q6PIU1 500 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 GLYCTKQ8IVS8 523 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 COG1Q8WTW3 980 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 FAM213AQ9BRX8 229 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 TSKSQ9UJT2 592 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 PCDHGC5Q9Y5F6 944 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 FOXN3O00409 490 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 PMM2O15305 246 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 FTCDO95954 541 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 PRLRP16471 622 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 ARL2P36404 184 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 KRT39Q6A163 491 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 TMC2Q8TDI7 906 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 GLG1Q92896 1179 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 MFSD14AQ96MC6 490 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 CEP89Q96ST8 783 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 PNKPQ96T60 521 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 POP1Q99575 1024 aaKnown RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 TLR10Q9BXR5 811 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
ITGB1-202ENST00000396033 TOPORSQ9NS56 1045 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 SEPT11Q9NVA2 429 aaKnown RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 RNF216Q9NWF9 866 aaPredicted RBP13.15□□□□□ -0.3
ITGB1-202ENST00000396033 PDE2AO00408 941 aaPredicted RBP13.15□□□□□ -0.31
ITGB1-202ENST00000396033 H2AFZP0C0S5 128 aa13.15□□□□□ -0.31
ITGB1-202ENST00000396033 DLATP10515 647 aaKnown RBP13.15□□□□□ -0.31
ITGB1-202ENST00000396033 MARK3P27448 753 aa13.15□□□□□ -0.31
ITGB1-202ENST00000396033 CXCR5P32302 372 aa13.15□□□□□ -0.31
ITGB1-202ENST00000396033 NOP2P46087 812 aaKnown RBP13.15□□□□□ -0.31
ITGB1-202ENST00000396033 H2AFVQ71UI9 128 aa13.15□□□□□ -0.31
ITGB1-202ENST00000396033 VTI1AQ96AJ9 217 aa13.15□□□□□ -0.31
ITGB1-202ENST00000396033 ATP8B3O60423 1300 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 POTEJP0CG39 1038 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 MAP1SQ66K74 1059 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 CC2D1AQ6P1N0 951 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 CREG2Q8IUH2 290 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 FAM167AQ96KS9 214 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 EFCC1Q9HA90 598 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 USP20Q9Y2K6 914 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 GRID2IPA4D2P6 1211 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 DNA2P51530 1060 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 KIF22Q14807 665 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 BRD3Q15059 726 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 TARBP2Q15633 366 aaKnown RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 IFI16Q16666 785 aaKnown RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 CELF3Q5SZQ8 465 aaKnown RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 CCDC181Q5TID7 509 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 TRIM50Q86XT4 487 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 GPR20Q99678 358 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 ARFGAP3Q9NP61 516 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 TMCO5BA8MYB1 307 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 MCCD1P59942 119 aaPredicted RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
ITGB1-202ENST00000396033 HSDL1Q3SXM5 330 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 PPM1KQ8N3J5 372 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 SHCBP1Q8NEM2 672 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 SLC30A5Q8TAD4 765 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 OLIG1Q8TAK6 271 aa13.14□□□□□ -0.31
ITGB1-202ENST00000396033 ZNF233A6NK53 670 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 K7ERI5 159 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 EXTL3O43909 919 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 TNFAIP3P21580 790 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 SCP2P22307 547 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 USP8P40818 1118 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 C2orf54Q08AI8 447 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 GTF3C2Q8WUA4 911 aaPredicted RBP13.13□□□□□ -0.31
ITGB1-202ENST00000396033 SEMA4DQ92854 862 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 KAT5Q92993 513 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 SPATA33Q96N06 139 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 SYT11Q9BT88 431 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 RAB21Q9UL25 225 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 INTUQ9ULD6 942 aa13.13□□□□□ -0.31
ITGB1-202ENST00000396033 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
ITGB1-202ENST00000396033 DHX37Q8IY37 1157 aaKnown RBP13.13□□□□□ -0.31
ITGB1-202ENST00000396033 UBXN6Q9BZV1 441 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms