RNA–Protein interactions for RNA: ENST00000395812.6

CAST-206, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAST, Length 4,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-206ENST00000395812 PRAMEF19Q5SWL8 479 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 GJC2Q5T442 439 aaPredicted RBP13.77□□□□□ -0.21
CAST-206ENST00000395812 SLC30A10Q6XR72 485 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 CTU1Q7Z7A3 348 aaKnown RBP13.77□□□□□ -0.21
CAST-206ENST00000395812 CTAGE3PQ8IX95 158 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 REPS2Q8NFH8 660 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 HVCN1Q96D96 273 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 GPR25O00155 361 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 PDXKO00764 312 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 VTNP04004 478 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 THP07101 528 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 KRT33BQ14525 404 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 KCTD6Q8NC69 237 aa13.77□□□□□ -0.21
CAST-206ENST00000395812 GAS2L1Q99501 681 aaPredicted RBP13.77□□□□□ -0.21
CAST-206ENST00000395812 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.77□□□□□ -0.21
CAST-206ENST00000395812 SMIM23A6NLE4 172 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 CALB1P05937 261 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 ODC1P11926 461 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 PPARGP37231 505 aaPredicted RBP13.76□□□□□ -0.21
CAST-206ENST00000395812 MKL1Q969V6 931 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 IRAK4Q9NWZ3 460 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 PPME1Q9Y570 386 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 EIF3CLB5ME19 914 aaKnown RBP13.76□□□□□ -0.21
CAST-206ENST00000395812 CCL23P55773 120 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 CES5AQ6NT32 575 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 FAM133AQ8N9E0 248 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 EIF3CQ99613 913 aaKnown RBP13.76□□□□□ -0.21
CAST-206ENST00000395812 LRRD1A4D1F6 860 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 IKBKBO14920 756 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 MCF2LO15068 1137 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 PSMA2P25787 234 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 TUBB2AQ13885 445 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 SGSM1Q2NKQ1 1148 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 PPP6R3Q5H9R7 873 aaPredicted RBP13.76□□□□□ -0.21
CAST-206ENST00000395812 SYT10Q6XYQ8 523 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 AFAP1L2Q8N4X5 818 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 DNAAF3Q8N9W5 541 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 DDX27Q96GQ7 796 aaKnown RBP13.76□□□□□ -0.21
CAST-206ENST00000395812 TUBB2BQ9BVA1 445 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 UNC45AQ9H3U1 944 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 SENP2Q9HC62 589 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 KLK14Q9P0G3 267 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 UNCXA6NJT0 531 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 KCNK3O14649 394 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 CACNB2Q08289 660 aaPredicted RBP13.76□□□□□ -0.21
CAST-206ENST00000395812 ATP2A3Q93084 1043 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 SENP7Q9BQF6 1050 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 EMILIN2Q9BXX0 1053 aa13.76□□□□□ -0.21
CAST-206ENST00000395812 COL3A1P02461 1466 aaPredicted RBP13.75□□□□□ -0.21
CAST-206ENST00000395812 TCRBV5S4A2TA0A5A2 114 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 DNAJB2P25686 324 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 LMNB2Q03252 620 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 KLHL7Q8IXQ5 586 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 MRRFQ96E11 262 aaKnown RBP13.75□□□□□ -0.21
CAST-206ENST00000395812 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.75□□□□□ -0.21
CAST-206ENST00000395812 TRPV2Q9Y5S1 764 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 SLC4A7Q9Y6M7 1214 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 TLR2O60603 784 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 MAN1A1P33908 653 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 COG7P83436 770 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 KCNH2Q12809 1159 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 DPCR1Q3MIW9 517 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 LMBRD2Q68DH5 695 aaPredicted RBP13.75□□□□□ -0.21
CAST-206ENST00000395812 CDR2LQ86X02 465 aaPredicted RBP13.75□□□□□ -0.21
CAST-206ENST00000395812 DAGLBQ8NCG7 672 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 REEP2Q9BRK0 252 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 HAUS4Q9H6D7 363 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 ASNSD1Q9NWL6 643 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 HSPBP1Q9NZL4 362 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 MUTP22033 750 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 NAMPTP43490 491 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 CCDC15Q0P6D6 951 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 PTPROQ16827 1216 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 ZNF280DQ6N043 979 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 SIK2Q9H0K1 926 aa13.75□□□□□ -0.21
CAST-206ENST00000395812 EPN1Q9Y6I3 576 aaPredicted RBP13.75□□□□□ -0.21
CAST-206ENST00000395812 A0A087WZ62 844 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 EFCAB14O75071 495 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 KRT1P04264 644 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 PDGFRBP09619 1106 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 CA4P22748 312 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 KLRC2P26717 231 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 FDXACB1Q9BRP7 624 aaPredicted RBP13.74□□□□□ -0.21
CAST-206ENST00000395812 TRIM7Q9C029 511 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 TMEM63CQ9P1W3 806 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 MAP3K7O43318 606 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 GNA15P30679 374 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 VPS41P49754 854 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 RPL10AP62906 217 aaKnown RBP13.74□□□□□ -0.21
CAST-206ENST00000395812 NCOA4Q13772 614 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 DDX53Q86TM3 631 aaKnown RBP13.74□□□□□ -0.21
CAST-206ENST00000395812 UCMAQ8WVF2 138 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 ARFGAP3Q9NP61 516 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 EMSYQ7Z589 1322 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 OGTO15294 1046 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 MYBP10242 640 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 U2AF2P26368 475 aaKnown RBP eCLIP13.74□□□□□ -0.215e-13■■■□□ 18.9
CAST-206ENST00000395812 ABI2Q9NYB9 513 aaPredicted RBP13.74□□□□□ -0.21
CAST-206ENST00000395812 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
CAST-206ENST00000395812 CD2BP2O95400 341 aaKnown RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms