RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 FEM1BQ9UK73 627 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 COG5Q9UP83 839 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 NOC2LQ9Y3T9 749 aaKnown RBP16.77■□□□□ 0.27
PTBP1-204ENST00000394601 NR2E1Q9Y466 385 aa16.77■□□□□ 0.27
PTBP1-204ENST00000394601 RLFQ13129 1914 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 NFIBO00712 420 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 VIMP08670 466 aaKnown RBP16.76■□□□□ 0.27
PTBP1-204ENST00000394601 HSPA9P38646 679 aaKnown RBP16.76■□□□□ 0.27
PTBP1-204ENST00000394601 KIF22Q14807 665 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 ZYXQ15942 572 aaKnown RBP16.76■□□□□ 0.27
PTBP1-204ENST00000394601 UAP1Q16222 522 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-204ENST00000394601 KRT71Q3SY84 523 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 ARMC2Q8NEN0 867 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.76■□□□□ 0.273e-9■■□□□ 12.7
PTBP1-204ENST00000394601 NOD2Q9HC29 1040 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 PPP1R9AQ9ULJ8 1098 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 GMNCA6NCL1 334 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 TMCO5BA8MYB1 307 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 ICAM1P05362 532 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 H2AFZP0C0S5 128 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 CYP2J2P51589 502 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 BFSP1Q12934 665 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 TRAF1Q13077 416 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 H2AFVQ71UI9 128 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 SUPT20HQ8NEM7 779 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 SLC35G2Q8TBE7 412 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
PTBP1-204ENST00000394601 SEC16BQ96JE7 1060 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 PSMD1Q99460 953 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 MLXIPLQ9NP71 852 aa16.76■□□□□ 0.27
PTBP1-204ENST00000394601 TTC7AQ9ULT0 858 aaPredicted RBP16.76■□□□□ 0.27
PTBP1-204ENST00000394601 RASSF9O75901 435 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 FAM107AO95990 144 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 FAM160B2Q86V87 743 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 TEKT3Q9BXF9 490 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 PDGFDQ9GZP0 370 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-204ENST00000394601 CAND2O75155 1236 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 MAGOHP61326 146 aaKnown RBP16.75■□□□□ 0.27
PTBP1-204ENST00000394601 PPP3CAQ08209 521 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 PAK2Q13177 524 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 LMBR1Q8WVP7 490 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 MAGOHBQ96A72 148 aaKnown RBP16.75■□□□□ 0.27
PTBP1-204ENST00000394601 ATP6V1G3Q96LB4 118 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 UBIAD1Q9Y5Z9 338 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 ZHX2Q9Y6X8 837 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 FOXN3O00409 490 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-204ENST00000394601 TMEM253P0C7T8 217 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 DGKZQ13574 1117 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 MYBPC2Q14324 1141 aa16.75■□□□□ 0.27
PTBP1-204ENST00000394601 TAF1DQ9H5J8 278 aaPredicted RBP16.75■□□□□ 0.27
PTBP1-204ENST00000394601 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
PTBP1-204ENST00000394601 FLT3P36888 993 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 MKRN4PQ13434 485 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-204ENST00000394601 CRYMQ14894 314 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 DLGAP5Q15398 846 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 PADI6Q6TGC4 694 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 FAM83AQ86UY5 434 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 C1orf131Q8NDD1 294 aaKnown RBP16.74■□□□□ 0.27
PTBP1-204ENST00000394601 WHAMMQ8TF30 809 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 AGO4Q9HCK5 861 aaKnown RBP16.74■□□□□ 0.27
PTBP1-204ENST00000394601 USP20Q9Y2K6 914 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 CTNND1O60716 968 aaKnown RBP16.74■□□□□ 0.27
PTBP1-204ENST00000394601 ANP32DO95626 131 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 RARRES1P49788 294 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 PLS1Q14651 629 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 EPC2Q52LR7 807 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 GKAP1Q5VSY0 366 aaPredicted RBP16.74■□□□□ 0.27
PTBP1-204ENST00000394601 C12orf56Q8IXR9 622 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 CCDC63Q8NA47 563 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 HOOK2Q96ED9 719 aa16.74■□□□□ 0.27
PTBP1-204ENST00000394601 ARID2Q68CP9 1835 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 PGRMC1O00264 195 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 CEP104O60308 925 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 PDHA1P08559 390 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 SLCO1A2P46721 670 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 PRPF4BQ13523 1007 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 UGCGQ16739 394 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 CAPRIN2Q6IMN6 1127 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 NIPA1Q7RTP0 329 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 ARHGEF19Q8IW93 802 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 ELAC2Q9BQ52 826 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 DBR1Q9UK59 544 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 MAPTP10636 758 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 TNNC1P63316 161 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 IFI16Q16666 785 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 TKFCQ3LXA3 575 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 ANKRD20A8PQ5CZ79 823 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 RFFLQ8WZ73 363 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 CBWD1Q9BRT8 395 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 DDX47Q9H0S4 455 aaKnown RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 THAP2Q9H0W7 228 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 ZNF277Q9NRM2 450 aaPredicted RBP16.73■□□□□ 0.27
PTBP1-204ENST00000394601 BCS1LQ9Y276 419 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 TMEM150BA6NC51 233 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 LYPLA2O95372 231 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 LMNB1P20700 586 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 TCEAL1Q15170 157 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 PEX26Q7Z412 305 aa16.73■□□□□ 0.27
PTBP1-204ENST00000394601 DAAM2Q86T65 1068 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms