RNA–Protein interactions for RNA: ENST00000394331.3

HOXC6-202, Transcript of homeobox C6, humanhuman

TSL 1 (best) BASIC

Gene HOXC6, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-202ENST00000394331 TRAFD1O14545 582 aaPredicted RBP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 PPEF1O14829 653 aaPredicted RBP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 MARCH6O60337 910 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 MYBL1P10243 752 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 SF3A3Q12874 501 aaKnown RBP eCLIP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 USP4Q13107 963 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 SLC29A2Q14542 456 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 CELF4Q9BZC1 486 aaKnown RBP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 USP40Q9NVE5 1235 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 SPATA31A6Q5VVP1 1343 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 TLDC2A0PJX2 215 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 GM2AP17900 193 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 ACBD5Q5T8D3 534 aaPredicted RBP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 HES6Q96HZ4 224 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 GLT8D2Q9H1C3 349 aa20.24■□□□□ 0.83
HOXC6-202ENST00000394331 DDX4Q9NQI0 724 aaKnown RBP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 BMP2KQ9NSY1 1161 aaPredicted RBP20.24■□□□□ 0.83
HOXC6-202ENST00000394331 UBAP1LF5GYI3 381 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ZBTB5O15062 677 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 HLA-DOAP06340 250 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 KLHL30Q0D2K2 578 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 GSTA3Q16772 222 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ZDHHC24Q6UX98 284 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 PHC3Q8NDX5 983 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 NUDT12Q9BQG2 462 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ZC3H12CQ9C0D7 883 aaKnown RBP20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ZCWPW1Q9H0M4 648 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 PARP2Q9UGN5 583 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 RASGRF2O14827 1237 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 RIMBP2O15034 1052 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ATP5DP30049 168 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 DR1Q01658 176 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 MGAT5Q09328 741 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 MTFR1Q15390 333 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 EXOC3L1Q86VI1 746 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 TRIM51Q9BSJ1 452 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 MMADHCQ9H3L0 296 aaPredicted RBP20.23■□□□□ 0.83
HOXC6-202ENST00000394331 DAAM1Q9Y4D1 1078 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 BZW2Q9Y6E2 419 aaKnown RBP20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ZRSR2Q15696 482 aaKnown RBP20.23■□□□□ 0.83
HOXC6-202ENST00000394331 UBE2SQ16763 222 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 PEX26Q7Z412 305 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 GATA6Q92908 595 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 NT5C3AQ9H0P0 336 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 PSTPIP2Q9H939 334 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 NMRK1Q9NWW6 199 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 ADAMTS1Q9UHI8 967 aa20.23■□□□□ 0.83
HOXC6-202ENST00000394331 KDM3AQ9Y4C1 1321 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 POLRMTO00411 1230 aaKnown RBP20.22■□□□□ 0.83
HOXC6-202ENST00000394331 TPP2P29144 1249 aaPredicted RBP20.22■□□□□ 0.83
HOXC6-202ENST00000394331 GSTT1P30711 240 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 SHMT1P34896 483 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 RASSF2P50749 326 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 ASIC2Q16515 512 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 SLC27A3Q5K4L6 730 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 ECHDC2Q86YB7 292 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 CLEC10AQ8IUN9 316 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 MYOCDQ8IZQ8 938 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.22■□□□□ 0.83
HOXC6-202ENST00000394331 TLE6Q9H808 572 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 INTUQ9ULD6 942 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 PCDHA12Q9UN75 941 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 PPP1R11O60927 126 aaPredicted RBP20.22■□□□□ 0.83
HOXC6-202ENST00000394331 HAS1Q92839 578 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 CCDC17Q96LX7 622 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 RUNDC3BQ96NL0 473 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 HAPLN3Q96S86 360 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 GOPCQ9HD26 462 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 RASAL2Q9UJF2 1139 aa20.22■□□□□ 0.83
HOXC6-202ENST00000394331 G3BP2Q9UN86 482 aaKnown RBP20.22■□□□□ 0.83
HOXC6-202ENST00000394331 TJP3O95049 919 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 CACNA2D1P54289 1103 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 YARSP54577 528 aaKnown RBP20.21■□□□□ 0.83
HOXC6-202ENST00000394331 KIAA1755Q5JYT7 1200 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 TTBK2Q6IQ55 1244 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 KCNK18Q7Z418 384 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 PROCA1Q8NCQ7 364 aaPredicted RBP20.21■□□□□ 0.83
HOXC6-202ENST00000394331 UCMAQ8WVF2 138 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 CIDEBQ9UHD4 219 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 NENFQ9UMX5 172 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 SMAPO00193 183 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 SLC26A4O43511 780 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 KPNB1Q14974 876 aaKnown RBP20.21■□□□□ 0.83
HOXC6-202ENST00000394331 HYIQ5T013 277 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 CGB2Q6NT52 195 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 INTS8Q75QN2 995 aaKnown RBP20.21■□□□□ 0.83
HOXC6-202ENST00000394331 NT5DC3Q86UY8 548 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 LONP2Q86WA8 852 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 CERS5Q8N5B7 392 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 EPS8L3Q8TE67 593 aaKnown RBP20.21■□□□□ 0.83
HOXC6-202ENST00000394331 MAGEB18Q96M61 343 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 FOCADQ5VW36 1801 aa20.21■□□□□ 0.83
HOXC6-202ENST00000394331 KIAA0391O15091 583 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 ONECUT3O60422 494 aaPredicted RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 ABCD1P33897 745 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 FKBP3Q00688 224 aaKnown RBP20.2■□□□□ 0.82
HOXC6-202ENST00000394331 SETDB1Q15047 1291 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 HHIPL2Q6UWX4 724 aa20.2■□□□□ 0.82
HOXC6-202ENST00000394331 DAAM2Q86T65 1068 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms