RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 TMEM119Q4V9L6 283 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 PLPP4Q5VZY2 271 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 ZNF280BQ86YH2 543 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 HACE1Q8IYU2 909 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 CALML4Q96GE6 196 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 DRC1Q96MC2 740 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 ENTPD7Q9NQZ7 604 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 KANSL3Q9P2N6 904 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 DNAJB4Q9UDY4 337 aa33.93■■■■□ 3.02
CMTM4-202ENST00000394106 CCDC169A6NNP5 214 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 LONP1P36776 959 aaKnown RBP33.92■■■■□ 3.02
CMTM4-202ENST00000394106 MLH1P40692 756 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 PEX3P56589 373 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 RAD51AP2Q09MP3 1159 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 DAW1Q8N136 415 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 KCTD17Q8N5Z5 321 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 RASSF8Q8NHQ8 419 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 FAM193BQ96PV7 902 aaPredicted RBP33.92■■■■□ 3.02
CMTM4-202ENST00000394106 UHRF1Q96T88 793 aaPredicted RBP33.92■■■■□ 3.02
CMTM4-202ENST00000394106 GAD1Q99259 594 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 TCF25Q9BQ70 676 aa33.92■■■■□ 3.02
CMTM4-202ENST00000394106 ACKR2O00590 384 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 FSCN2O14926 492 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 LINC01565O15544 149 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 B4GALT3O60512 393 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 PLA2G4BP0C869 781 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 EFNA5P52803 228 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 PDE12Q6L8Q7 609 aaKnown RBP33.91■■■■□ 3.02
CMTM4-202ENST00000394106 SYT2Q8N9I0 419 aaPredicted RBP33.91■■■■□ 3.02
CMTM4-202ENST00000394106 TMEM169Q96HH4 297 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 NECAB3Q96P71 396 aaPredicted RBP33.91■■■■□ 3.02
CMTM4-202ENST00000394106 PDZD7Q9H5P4 517 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 TLE6Q9H808 572 aa33.91■■■■□ 3.02
CMTM4-202ENST00000394106 SPTBN5Q9NRC6 3674 aaKnown RBP33.91■■■■□ 3.02
CMTM4-202ENST00000394106 ARL5CA6NH57 179 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 N4BP3O15049 544 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 SLC26A4O43511 780 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 DDHD2O94830 711 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 GALTP07902 379 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 AKAP5P24588 427 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 MARCKSP29966 332 aaPredicted RBP33.9■■■■□ 3.02
CMTM4-202ENST00000394106 NPTX2P47972 431 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 MAPK7Q13164 816 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 DMP1Q13316 513 aaPredicted RBP33.9■■■■□ 3.02
CMTM4-202ENST00000394106 PTPAQ15257 358 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 CTC1Q2NKJ3 1217 aa33.9■■■■□ 3.02
CMTM4-202ENST00000394106 TMEM173Q86WV6 379 aaPredicted RBP33.9■■■■□ 3.02
CMTM4-202ENST00000394106 GADD45GIP1Q8TAE8 222 aaPredicted RBP33.9■■■■□ 3.02
CMTM4-202ENST00000394106 VCANP13611 3396 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 PER2O15055 1255 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 EDN1P05305 212 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 GUCY2CP25092 1073 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 LTBRP36941 435 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 SLC11A1P49279 550 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 SLC12A3P55017 1021 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 TMC7Q7Z402 723 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 ZFP42Q96MM3 310 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 TIPINQ9BVW5 301 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 ZSCAN16Q9H4T2 348 aaPredicted RBP33.89■■■■□ 3.02
CMTM4-202ENST00000394106 PARP2Q9UGN5 583 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 GIT1Q9Y2X7 761 aa33.89■■■■□ 3.02
CMTM4-202ENST00000394106 CARNS1A5YM72 827 aa33.88■■■■□ 3.01
CMTM4-202ENST00000394106 SFI1A8K8P3 1242 aa33.88■■■■□ 3.01
CMTM4-202ENST00000394106 K7ERI5 159 aa33.88■■■■□ 3.01
CMTM4-202ENST00000394106 DLX2Q07687 328 aaPredicted RBP33.88■■■■□ 3.01
CMTM4-202ENST00000394106 ADAM15Q13444 863 aa33.88■■■■□ 3.01
CMTM4-202ENST00000394106 KARSQ15046 597 aaKnown RBP33.88■■■■□ 3.01
CMTM4-202ENST00000394106 PTCRAQ6ISU1 281 aaPredicted RBP33.88■■■■□ 3.01
CMTM4-202ENST00000394106 IGSF21Q96ID5 467 aa33.88■■■■□ 3.01
CMTM4-202ENST00000394106 KMT5AQ9NQR1 393 aa33.88■■■■□ 3.01
CMTM4-202ENST00000394106 NDUFV1P49821 464 aa33.87■■■■□ 3.01
CMTM4-202ENST00000394106 SCNN1GP51170 649 aa33.87■■■■□ 3.01
CMTM4-202ENST00000394106 DHX8Q14562 1220 aaKnown RBP33.87■■■■□ 3.01
CMTM4-202ENST00000394106 CLUL1Q15846 466 aa33.87■■■■□ 3.01
CMTM4-202ENST00000394106 EFHBQ8N7U6 833 aa33.87■■■■□ 3.01
CMTM4-202ENST00000394106 BCL7CQ8WUZ0 217 aaPredicted RBP33.87■■■■□ 3.01
CMTM4-202ENST00000394106 ADPGKQ9BRR6 497 aa33.87■■■■□ 3.01
CMTM4-202ENST00000394106 NGRNQ9NPE2 291 aaKnown RBP33.87■■■■□ 3.01
CMTM4-202ENST00000394106 KLK14Q9P0G3 267 aa33.87■■■■□ 3.01
CMTM4-202ENST00000394106 NPHP3-ACAD11A0A0J9YXS1 232 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 TBX10O75333 385 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 PLCG1P19174 1290 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 CA8P35219 290 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 SPECC1Q5M775 1068 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 EEF1DP3Q658K8 133 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 MIOSQ9NXC5 875 aa33.86■■■■□ 3.01
CMTM4-202ENST00000394106 FBXO2Q9UK22 296 aaPredicted RBP33.86■■■■□ 3.01
CMTM4-202ENST00000394106 MYH11P35749 1972 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 PHLPP2Q6ZVD8 1323 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 TDRD15B5MCY1 1934 aaKnown RBP33.85■■■■□ 3.01
CMTM4-202ENST00000394106 HIDE1A8MVS5 230 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 INPPL1O15357 1258 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 NT5DC1Q5TFE4 455 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 SPRYD3Q8NCJ5 442 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 LRRC15Q8TF66 581 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 USP28Q96RU2 1077 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 TMEM175Q9BSA9 504 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 C17orf75Q9HAS0 396 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 KCND2Q9NZV8 630 aa33.85■■■■□ 3.01
CMTM4-202ENST00000394106 FAN1Q9Y2M0 1017 aa33.85■■■■□ 3.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms