RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 DEXIO95424 95 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 ADH1AP07327 375 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 RFC5P40937 340 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 GLUD2P49448 558 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 SSRP1Q08945 709 aaKnown RBP17.18■□□□□ 0.34
CHMP3-202ENST00000393773 EMC2Q15006 297 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 FAM177A1Q8N128 213 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-202ENST00000393773 RSAD2Q8WXG1 361 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 CEP170P1Q96L14 293 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 FAM193BQ96PV7 902 aaPredicted RBP17.18■□□□□ 0.34
CHMP3-202ENST00000393773 LXNQ9BS40 222 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 WDR6Q9NNW5 1121 aaKnown RBP17.18■□□□□ 0.34
CHMP3-202ENST00000393773 EPS15L1Q9UBC2 864 aa17.18■□□□□ 0.34
CHMP3-202ENST00000393773 KRBA1A5PL33 1030 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 TSPAN1O60635 241 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 GLUD1P00367 558 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 ALDH2P05091 517 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 SRGAP2CP0DJJ0 459 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 MLH1P40692 756 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 AK2P54819 239 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 KIAA0319Q5VV43 1072 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 CYP26C1Q6V0L0 522 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 KRT25Q7Z3Z0 450 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 ZNF707Q96C28 371 aaPredicted RBP17.17■□□□□ 0.34
CHMP3-202ENST00000393773 MYADMQ96S97 322 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 EIF2AQ9BY44 585 aaKnown RBP17.17■□□□□ 0.34
CHMP3-202ENST00000393773 RXFP1Q9HBX9 757 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 IPPQ9Y573 584 aa17.17■□□□□ 0.34
CHMP3-202ENST00000393773 CEP250Q9BV73 2442 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 CCDC195A0A1B0GUA6 201 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 ARL5CA6NH57 179 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 GAS2O43903 313 aaKnown RBP17.16■□□□□ 0.34
CHMP3-202ENST00000393773 RFPL2O75678 378 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 CFHP08603 1231 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 PSMA5P28066 241 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 DSG1Q02413 1049 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 GALNT17Q6IS24 598 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 RUFY3Q7L099 469 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 FERMT3Q86UX7 667 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 EXOC8Q8IYI6 725 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 RNF149Q8NC42 400 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 CNNM3Q8NE01 707 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 FAM20AQ96MK3 541 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 ZFP42Q96MM3 310 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 UBN1Q9NPG3 1134 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 XPNPEP1Q9NQW7 623 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 WNT16Q9UBV4 365 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 SSX2IPQ9Y2D8 614 aa17.16■□□□□ 0.34
CHMP3-202ENST00000393773 NOTCH4Q99466 2003 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 CACNA1IQ9P0X4 2223 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
CHMP3-202ENST00000393773 ERLIN2O94905 339 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 P4HBP07237 508 aaKnown RBP17.15■□□□□ 0.34
CHMP3-202ENST00000393773 ITGA4P13612 1032 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 YWHABP31946 246 aaKnown RBP17.15■□□□□ 0.34
CHMP3-202ENST00000393773 GBP2P32456 591 aaPredicted RBP17.15■□□□□ 0.34
CHMP3-202ENST00000393773 OR1G1P47890 313 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 SCNN1GP51170 649 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 SPIRE1Q08AE8 756 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 PPP4R3AQ6IN85 833 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 ERMP1Q7Z2K6 904 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 C4orf19Q8IY42 314 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 SMG7Q92540 1137 aaKnown RBP17.15■□□□□ 0.34
CHMP3-202ENST00000393773 STAMQ92783 540 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 HAS1Q92839 578 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 CCDC51Q96ER9 411 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 GAD1Q99259 594 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 PHF20Q9BVI0 1012 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 CHST7Q9NS84 486 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 MIOSQ9NXC5 875 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 KCNJ14Q9UNX9 436 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 HES2Q9Y543 173 aa17.15■□□□□ 0.34
CHMP3-202ENST00000393773 CPLX1O14810 134 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 MYBP10242 640 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 SRFP11831 508 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 GCFC2P16383 781 aaKnown RBP17.14■□□□□ 0.33
CHMP3-202ENST00000393773 ID4P47928 161 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 PCBP1Q15365 356 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHMP3-202ENST00000393773 AMHR2Q16671 573 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 NOTUMQ6P988 496 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 POTEGQ6S5H5 508 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 NEK8Q86SG6 692 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 POTEDQ86YR6 584 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 IFNLR1Q8IU57 520 aaPredicted RBP17.14■□□□□ 0.33
CHMP3-202ENST00000393773 HDAC7Q8WUI4 952 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 CPB2Q96IY4 423 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 B3GALT6Q96L58 329 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 MTRQ99707 1265 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 NXF3Q9H4D5 531 aaKnown RBP17.14■□□□□ 0.33
CHMP3-202ENST00000393773 TBC1D17Q9HA65 648 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 DPP7Q9UHL4 492 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 CA14Q9ULX7 337 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 TRIP11Q15643 1979 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 ZMYM2Q9UBW7 1377 aa17.14■□□□□ 0.33
CHMP3-202ENST00000393773 TBX3O15119 743 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 ASAP2O43150 1006 aa17.13■□□□□ 0.33
CHMP3-202ENST00000393773 AXLP30530 894 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms