RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 ERAP1Q9NZ08 941 aa24.09■■□□□ 1.45
HMGA2-203ENST00000393578 CDC23Q9UJX2 597 aa24.09■■□□□ 1.45
HMGA2-203ENST00000393578 MACROD2A1Z1Q3 448 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 EXTL3O43909 919 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 SNAI1O95863 264 aaPredicted RBP24.08■■□□□ 1.45
HMGA2-203ENST00000393578 EFNA5P52803 228 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 DRP2Q13474 957 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 C10orf76Q5T2E6 689 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 PSPC1Q8WXF1 523 aaKnown RBP24.08■■□□□ 1.45
HMGA2-203ENST00000393578 VTI1AQ96AJ9 217 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 CARD6Q9BX69 1037 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 TRPC6Q9Y210 931 aa24.08■■□□□ 1.45
HMGA2-203ENST00000393578 ZNF233A6NK53 670 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 LRRIQ3A6PVS8 624 aaPredicted RBP24.07■■□□□ 1.44
HMGA2-203ENST00000393578 KRT39Q6A163 491 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 RASAL3Q86YV0 1011 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 PPTC7Q8NI37 304 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 FAM213AQ9BRX8 229 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 SUGCTQ9HAC7 445 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 TMEM8AQ9HCN3 771 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 ZCCHC17Q9NP64 241 aaKnown RBP24.07■■□□□ 1.44
HMGA2-203ENST00000393578 SLC15A5A6NIM6 579 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 CCDC172P0C7W6 258 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 ZNF157P51786 506 aaPredicted RBP24.07■■□□□ 1.44
HMGA2-203ENST00000393578 MKRN4PQ13434 485 aaPredicted RBP24.07■■□□□ 1.44
HMGA2-203ENST00000393578 NAA30Q147X3 362 aaPredicted RBP24.07■■□□□ 1.44
HMGA2-203ENST00000393578 VPS36Q86VN1 386 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 LRRN4CLQ8ND94 238 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 TRIM58Q8NG06 486 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 ANKRD7Q92527 254 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 GPR88Q9GZN0 384 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 COQ4Q9Y3A0 265 aa24.07■■□□□ 1.44
HMGA2-203ENST00000393578 MANSC4A6NHS7 340 aaPredicted RBP24.06■■□□□ 1.44
HMGA2-203ENST00000393578 EVI5O60447 810 aa24.06■■□□□ 1.44
HMGA2-203ENST00000393578 GFPT2O94808 682 aa24.06■■□□□ 1.44
HMGA2-203ENST00000393578 LAMTOR4Q0VGL1 99 aa24.06■■□□□ 1.44
HMGA2-203ENST00000393578 AGO2Q9UKV8 859 aaKnown RBP24.06■■□□□ 1.44
HMGA2-203ENST00000393578 ADCYAP1R1P41586 468 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 GJC2Q5T442 439 aaPredicted RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 CDCA2Q69YH5 1023 aaPredicted RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 ZNF710Q8N1W2 664 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 RNF10Q8N5U6 811 aaKnown RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 TINF2Q9BSI4 451 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 SLC5A4Q9NY91 659 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 ZNF236Q9UL36 1845 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 ANO9A1A5B4 782 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 EFCAB8A8MWE9 144 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 TACC1O75410 805 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 LGALS2P05162 132 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 PNMA6AP0CW24 399 aaPredicted RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 AMPD2Q01433 879 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 MAP2K1Q02750 393 aaPredicted RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 MSL3Q8N5Y2 521 aaKnown RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 POP1Q99575 1024 aaKnown RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 TARS2Q9BW92 718 aaKnown RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 ABHD16BQ9H3Z7 469 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 UBE2TQ9NPD8 197 aaPredicted RBP24.05■■□□□ 1.44
HMGA2-203ENST00000393578 ADGRA2Q96PE1 1338 aa24.05■■□□□ 1.44
HMGA2-203ENST00000393578 TADA3O75528 432 aa24.04■■□□□ 1.44
HMGA2-203ENST00000393578 LDHAP00338 332 aaKnown RBP24.04■■□□□ 1.44
HMGA2-203ENST00000393578 BMS1Q14692 1282 aaKnown RBP24.04■■□□□ 1.44
HMGA2-203ENST00000393578 NAB2Q15742 525 aa24.04■■□□□ 1.44
HMGA2-203ENST00000393578 ZPBP2Q6X784 338 aa24.04■■□□□ 1.44
HMGA2-203ENST00000393578 LRRC71Q8N4P6 559 aa24.04■■□□□ 1.44
HMGA2-203ENST00000393578 RNPEPQ9H4A4 650 aa24.04■■□□□ 1.44
HMGA2-203ENST00000393578 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.04■■□□□ 1.44
HMGA2-203ENST00000393578 CPA4Q9UI42 421 aa24.04■■□□□ 1.44
HMGA2-203ENST00000393578 V9GYY5 206 aaPredicted RBP24.04■■□□□ 1.44
HMGA2-203ENST00000393578 A0A0B4J269 797 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 IGF2BP3O00425 579 aaKnown RBP eCLIP24.03■■□□□ 1.443e-6■■■□□ 17.3
HMGA2-203ENST00000393578 CLDN10P78369 228 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 ZNF484Q5JVG2 852 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 PAPD7Q5XG87 772 aaKnown RBP24.03■■□□□ 1.44
HMGA2-203ENST00000393578 AFG1LQ8WV93 481 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 CCDC113Q9H0I3 377 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 SUCLA2Q9P2R7 463 aaPredicted RBP24.03■■□□□ 1.44
HMGA2-203ENST00000393578 NAGPAQ9UK23 515 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 PPFIA4O75335 1185 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 DLATP10515 647 aaKnown RBP24.03■■□□□ 1.44
HMGA2-203ENST00000393578 GPC3P51654 580 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 PSMD6Q15008 389 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 ARHGAP44Q17R89 818 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 KIAA0753Q2KHM9 967 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 ARHGEF19Q8IW93 802 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 ZBTB8OSQ8IWT0 167 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 RNF149Q8NC42 400 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 FBXL13Q8NEE6 735 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 TRAPPC12Q8WVT3 735 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 ALS2CR12Q96Q35 445 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 HAPLN2Q9GZV7 340 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 C2orf40Q9H1Z8 148 aa24.03■■□□□ 1.44
HMGA2-203ENST00000393578 ATP8B3O60423 1300 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 SRGAP2CP0DJJ0 459 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 ACVR2BQ13705 512 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 WHAMMP3Q1A5X7 153 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 DUSP28Q4G0W2 176 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 TRAPPC11Q7Z392 1133 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 SAPCD2Q86UD0 394 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 CEP112Q8N8E3 955 aa24.02■■□□□ 1.44
HMGA2-203ENST00000393578 NPLOC4Q8TAT6 608 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms