RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TTC7AQ9ULT0 858 aaPredicted RBP15.46■□□□□ 0.07
MKS1-203ENST00000393120 CSADQ9Y600 493 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 STYXL1Q9Y6J8 313 aa15.46■□□□□ 0.07
MKS1-203ENST00000393120 ADGRA3Q8IWK6 1321 aa15.46■□□□□ 0.06
MKS1-203ENST00000393120 ZC3H4Q9UPT8 1303 aaKnown RBP15.46■□□□□ 0.06
MKS1-203ENST00000393120 LRRN2O75325 713 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 GZMAP12544 262 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 ATP4AP20648 1035 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 TNNT3P45378 269 aaPredicted RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 ALDH5A1P51649 535 aaPredicted RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 EPHB4P54760 987 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 SOX10P56693 466 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 CLDN10P78369 228 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 CNTN2Q02246 1040 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 NNTQ13423 1086 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 METTL13Q8N6R0 699 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 PROCA1Q8NCQ7 364 aaPredicted RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 FBXL13Q8NEE6 735 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 POMGNT1Q8WZA1 660 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 CAVIN3Q969G5 261 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.45■□□□□ 0.066e-8■■■■■ 30.2
MKS1-203ENST00000393120 DHX33Q9H6R0 707 aaKnown RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 BTBD7Q9P203 1132 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 AMFRQ9UKV5 643 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 A0A0U1RQG5 324 aaPredicted RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 BUB1BO60566 1050 aaPredicted RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 ZC3H11AO75152 810 aaKnown RBP eCLIP15.45■□□□□ 0.06
MKS1-203ENST00000393120 OATP04181 439 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 TGFB3P10600 412 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 SLC7A5Q01650 507 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 MAP2K1Q02750 393 aaPredicted RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 PRKG1Q13976 671 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 EMC2Q15006 297 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 CYFIP1Q7L576 1253 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 TAS1R3Q7RTX0 852 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 HELQQ8TDG4 1101 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.45■□□□□ 0.06
MKS1-203ENST00000393120 SEMA4DQ92854 862 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 EXOC4Q96A65 974 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 DCPSQ96C86 337 aaKnown RBP15.45■□□□□ 0.06
MKS1-203ENST00000393120 FAM81BQ96LP2 452 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 KREMEN1Q96MU8 473 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 PORCNQ9H237 461 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 PSD3Q9NYI0 1048 aa15.45■□□□□ 0.06
MKS1-203ENST00000393120 DICER1Q9UPY3 1922 aaKnown RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 A0A0G2JLL6 359 aaPredicted RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 CCDC188H7C350 402 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 PGRMC1O00264 195 aaKnown RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 IRF6O14896 467 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 HNRNPDLO14979 420 aaKnown RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 PIGRP01833 764 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 CYP2C19P33261 490 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 DNA2P51530 1060 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 PRPF4BQ13523 1007 aaKnown RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.44■□□□□ 0.06
MKS1-203ENST00000393120 ENOSF1Q7L5Y1 443 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 PRRT2Q7Z6L0 340 aaPredicted RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 SULF1Q8IWU6 871 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 EPS8L1Q8TE68 723 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 SLC20A1Q8WUM9 679 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 CCDC127Q96BQ5 260 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 CEP89Q96ST8 783 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 SPATC1LQ9H0A9 340 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 THAP2Q9H0W7 228 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 GOLPH3Q9H4A6 298 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 OSGEPQ9NPF4 335 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 RAB20Q9NX57 234 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 TAS2R14Q9NYV8 317 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 NOCTQ9UK39 431 aaKnown RBP15.44■□□□□ 0.06
MKS1-203ENST00000393120 ADAM21Q9UKJ8 722 aa15.44■□□□□ 0.06
MKS1-203ENST00000393120 KIAA1217Q5T5P2 1943 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 ZNF233A6NK53 670 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 TMCO5BA8MYB1 307 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 CXCL11O14625 94 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 EXTL3O43909 919 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 CEP104O60308 925 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 RTN2O75298 545 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 FTLP02792 175 aaPredicted RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 GLI1P08151 1106 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 ARL2P36404 184 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 NAMPTP43490 491 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 IREB2P48200 963 aaKnown RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 POLGP54098 1239 aaPredicted RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 SP4Q02446 784 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 FSTL1Q12841 308 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 MTERF2Q49AM1 385 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 C15orf39Q6ZRI6 1047 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 SV2AQ7L0J3 742 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 ZNF771Q7L3S4 317 aaPredicted RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 PALB2Q86YC2 1186 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 RPUSD2Q8IZ73 545 aaKnown RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 NT5C1BQ96P26 610 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 KRT12Q99456 494 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 PPME1Q9Y570 386 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 A0A0G2JMZ2 1700 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 MTA2O94776 668 aa15.43■□□□□ 0.06
MKS1-203ENST00000393120 DDNO94850 711 aaPredicted RBP15.43■□□□□ 0.06
MKS1-203ENST00000393120 SYF2O95926 243 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms