RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 RNF149Q8NC42 400 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 NLRP4Q96MN2 994 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 PI4K2AQ9BTU6 479 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 MINDY3Q9H8M7 445 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 PLCB1Q9NQ66 1216 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 PLXNB2O15031 1838 aa16.27■□□□□ 0.19
MKS1-202ENST00000393119 PTPRJQ12913 1337 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 PHLPP2Q6ZVD8 1323 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 FAM155AB1AL88 458 aaPredicted RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 B4GALT5O43286 388 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 IQCF3P0C7M6 154 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 CDK17Q00537 523 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 ACVR2BQ13705 512 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 ASIC2Q16515 512 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 KCNV1Q6PIU1 500 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 INTS8Q75QN2 995 aaKnown RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 PARD3BQ8TEW8 1205 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 GTF3C2Q8WUA4 911 aaPredicted RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 ZNF516Q92618 1163 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 IFIH1Q9BYX4 1025 aaKnown RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 EPC1Q9H2F5 836 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 C17orf75Q9HAS0 396 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 EXOC7Q9UPT5 735 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 KIF5CO60282 957 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 NAMPTP43490 491 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 JAM2P57087 298 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 RTP1P59025 263 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 DRAP1Q14919 205 aaPredicted RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 PPP2R5AQ15172 486 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 EFCAB12Q6NXP0 572 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 CRELD2Q6UXH1 353 aaPredicted RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 PLPPR4Q7Z2D5 763 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 IFNL1Q8IU54 200 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 ARHGAP39Q9C0H5 1083 aa16.26■□□□□ 0.19
MKS1-202ENST00000393119 SUCLA2Q9P2R7 463 aaPredicted RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 ABT1Q9ULW3 272 aaKnown RBP16.26■□□□□ 0.19
MKS1-202ENST00000393119 ADGRA2Q96PE1 1338 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 TNFSF9P41273 254 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 MATR3P43243 847 aaKnown RBP eCLIP16.25■□□□□ 0.19
MKS1-202ENST00000393119 CAP1Q01518 475 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 PPP2R3AQ06190 1150 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 SLC20A2Q08357 652 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 SLC9C1Q4G0N8 1177 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 FBXO38Q6PIJ6 1188 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 PAXIP1Q6ZW49 1069 aaPredicted RBP16.25■□□□□ 0.19
MKS1-202ENST00000393119 TAS1R2Q8TE23 839 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 ERO1AQ96HE7 468 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 C16orf70Q9BSU1 422 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 CARD6Q9BX69 1037 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 SMARCAD1Q9H4L7 1026 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 PDE11AQ9HCR9 933 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 UBE2TQ9NPD8 197 aaPredicted RBP16.25■□□□□ 0.19
MKS1-202ENST00000393119 AIPL1Q9NZN9 384 aa16.25■□□□□ 0.19
MKS1-202ENST00000393119 GOLGA6L9A6NEM1 432 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 KIF2AO00139 706 aaPredicted RBP16.24■□□□□ 0.19
MKS1-202ENST00000393119 FOXN3O00409 490 aaPredicted RBP16.24■□□□□ 0.19
MKS1-202ENST00000393119 BUB1O43683 1085 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 MOCS3O95396 460 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 GH1P01241 217 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 SERPING1P05155 500 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 RFC5P40937 340 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 CYP24A1Q07973 514 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 STRN3Q13033 797 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 CRHR2Q13324 411 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 BRDTQ58F21 947 aaPredicted RBP16.24■□□□□ 0.19
MKS1-202ENST00000393119 ABRAQ8N0Z2 381 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 EHBP1Q8NDI1 1231 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 EDEM3Q9BZQ6 932 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 L2HGDHQ9H9P8 463 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 VTA1Q9NP79 307 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 CAPN6Q9Y6Q1 641 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 TULP2O00295 520 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 DYNC1LI2O43237 492 aaPredicted RBP16.24■□□□□ 0.19
MKS1-202ENST00000393119 ADCY3O60266 1144 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 SRGAP2O75044 1071 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 VTNP04004 478 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 MAGEA1P43355 309 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 MYBPC2Q14324 1141 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 SPA17Q15506 151 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 GPD1LQ8N335 351 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 PASKQ96RG2 1323 aa16.24■□□□□ 0.19
MKS1-202ENST00000393119 CCDC66A2RUB6 948 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 EVI5O60447 810 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 KLRC1P26715 233 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 MAPK4P31152 587 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 VAV2P52735 878 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 OSTNP61366 133 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 KRT83P78385 493 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 LAMC2Q13753 1193 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 EPC2Q52LR7 807 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 MORN1Q5T089 497 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 CYP4F22Q6NT55 531 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 C17orf99Q6UX52 265 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 PALB2Q86YC2 1186 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 OLIG1Q8TAK6 271 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 TATDN2Q93075 761 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 FBXL18Q96ME1 805 aa16.23■□□□□ 0.19
MKS1-202ENST00000393119 ZNF446Q9NWS9 450 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms