RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 GYPCP04921 128 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 ZNF157P51786 506 aaPredicted RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 Q4G0T1 1027 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 CENPUQ71F23 418 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 FAF2Q96CS3 445 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 EXOC1LA0A1B0GW35 172 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 PFDN6O15212 129 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 PNMA6AP0CW24 399 aaPredicted RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 CXCL9Q07325 125 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 BBS9Q3SYG4 887 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 RWDD4Q6NW29 188 aaKnown RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 SPATS2Q86XZ4 545 aaKnown RBP17.7■□□□□ 0.42
SCN3B-202ENST00000392770 CCDC68Q9H2F9 335 aa17.7■□□□□ 0.42
SCN3B-202ENST00000392770 CCL15-CCL14A0A0B4J2E2 113 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 CCL15Q16663 113 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 MOXD1Q6UVY6 613 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 A0A1W2PQJ5 194 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 SLC18A3Q16572 532 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 GPRC5AQ8NFJ5 357 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 MORC4Q8TE76 937 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 PRKAG2Q9UGJ0 569 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 AFG3L2Q9Y4W6 797 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 ACSL3O95573 720 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 CETPP11597 493 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 EIF3BP55884 814 aaKnown RBP17.69■□□□□ 0.42
SCN3B-202ENST00000392770 BACE1P56817 501 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 CPSF3Q9UKF6 684 aaKnown RBP17.69■□□□□ 0.42
SCN3B-202ENST00000392770 TAL1P17542 331 aaPredicted RBP17.69■□□□□ 0.42
SCN3B-202ENST00000392770 HOXD10P28358 340 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 CCT5P48643 541 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 RASSF2P50749 326 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 URGCPQ8TCY9 931 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 PARVAQ9NVD7 372 aa17.69■□□□□ 0.42
SCN3B-202ENST00000392770 PIN4Q9Y237 131 aaKnown RBP17.69■□□□□ 0.42
SCN3B-202ENST00000392770 A8MXQ7 604 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 SLC9A1P19634 815 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 DEPDC1BQ8WUY9 529 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 EPC1Q9H2F5 836 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 SMYD2Q9NRG4 433 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 TRIM10Q9UDY6 481 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 PCSK1NQ9UHG2 260 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 TSPY1Q01534 308 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 CC2D1AQ6P1N0 951 aaPredicted RBP17.68■□□□□ 0.42
SCN3B-202ENST00000392770 ANKEF1Q9NU02 776 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 DYNC1LI2O43237 492 aaPredicted RBP17.68■□□□□ 0.42
SCN3B-202ENST00000392770 ARP10275 920 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 CYP11B2P19099 503 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 TPD52P55327 224 aaPredicted RBP17.68■□□□□ 0.42
SCN3B-202ENST00000392770 PTF1AQ7RTS3 328 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 PYROXD1Q8WU10 500 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 IRX2Q9BZI1 471 aaPredicted RBP17.68■□□□□ 0.42
SCN3B-202ENST00000392770 KCNJ6P48051 423 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 RAD9BQ6WBX8 426 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 BZW1Q7L1Q6 419 aaKnown RBP17.68■□□□□ 0.42
SCN3B-202ENST00000392770 KIF9Q9HAQ2 790 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 SAYSD1Q9NPB0 183 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 NPEPPSP55786 919 aa17.68■□□□□ 0.42
SCN3B-202ENST00000392770 EP400NLQ6ZTU2 488 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 TTC39CQ8N584 583 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 RDM1Q8NG50 284 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 DDX47Q9H0S4 455 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 VCAM1P19320 739 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 NCAPGQ9BPX3 1015 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 IGSF9BQ9UPX0 1349 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 ZNF185O15231 689 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 SDC4P31431 198 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 TCF7P36402 384 aaPredicted RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 EARS2Q5JPH6 523 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 NBPF12Q5TAG4 269 aaPredicted RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 C4orf50Q6ZRC1 276 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 RBM43Q6ZSC3 357 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 LRRC71Q8N4P6 559 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 TTC13Q8NBP0 860 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 SLC35G2Q8TBE7 412 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 RSRC1Q96IZ7 334 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 CNOT10Q9H9A5 744 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 MAP3K20Q9NYL2 800 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 CAPN7Q9Y6W3 813 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 MT-ND3P03897 115 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 ACTR2P61160 394 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 UBE2Q2Q8WVN8 375 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 RAB3IPQ96QF0 476 aaPredicted RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 EVI5O60447 810 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 NR1D1P20393 614 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 SNRPFP62306 86 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 ADCY2Q08462 1091 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 RHOT1Q8IXI2 618 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 RYBPQ8N488 228 aaPredicted RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 KIFC3Q9BVG8 833 aa17.67■□□□□ 0.42
SCN3B-202ENST00000392770 ADARB2Q9NS39 739 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 DDX56Q9NY93 547 aaKnown RBP17.67■□□□□ 0.42
SCN3B-202ENST00000392770 SSU72P8A0A1W2PR75 194 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 RSPH10B2B2RC85 870 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 RSPH10BP0C881 870 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 MMP14P50281 582 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 DACT2Q5SW24 774 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 FAM102AQ5T9C2 384 aaPredicted RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 APOBEC3HQ6NTF7 200 aaKnown RBP17.66■□□□□ 0.42
SCN3B-202ENST00000392770 GDAP1Q8TB36 358 aa17.66■□□□□ 0.42
SCN3B-202ENST00000392770 CPA5Q8WXQ8 436 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms