RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 CLNS1AP54105 237 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 RPS6P62753 249 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 NEDD9Q14511 834 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 FAM43BQ6ZT52 329 aaPredicted RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 PAIP2Q9BPZ3 127 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 MTFR1LQ9H019 292 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 KCTD10Q9H3F6 313 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 ACTR5Q9H9F9 607 aaPredicted RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 PITPNM2Q9BZ72 1349 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 DNM1LO00429 736 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 WDR46O15213 610 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 SPOPO43791 374 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 SHBGP04278 402 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 FNTAP49354 379 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 COG2Q14746 738 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 ARHGAP27Q6ZUM4 889 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 FRMD5Q7Z6J6 570 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 MTMR14Q8NCE2 650 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 SCFD2Q8WU76 684 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 TEPSINQ96N21 525 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 NAP1L3Q99457 506 aaPredicted RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 METTL14Q9HCE5 456 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 AJAP1Q9UKB5 411 aaPredicted RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 STK38LQ9Y2H1 464 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 ZBED4O75132 1171 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 SCTRP47872 440 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 PMS2P54278 862 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 EDRF1Q3B7T1 1238 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 SWT1Q5T5J6 900 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 RMDN3Q96TC7 470 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 PRMT1Q99873 361 aaKnown RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 HSD17B14Q9BPX1 270 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 MXRA8Q9BRK3 442 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 POLR3CQ9BUI4 534 aaPredicted RBP11.68□□□□□ -0.54
BRF1-204ENST00000392557 OSBPL7Q9BZF2 842 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 PCIF1Q9H4Z3 704 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 SLITRK6Q9H5Y7 841 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 PARVGQ9HBI0 331 aa11.68□□□□□ -0.54
BRF1-204ENST00000392557 F8VZ95 297 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 CLGNO14967 610 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 PTGER2P43116 358 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 MTMR1Q13613 665 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 SLC29A2Q14542 456 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 ZKSCAN8Q15776 578 aaPredicted RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 SPRED3Q2MJR0 410 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 ARHGEF16Q5VV41 709 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 FBXO25Q8TCJ0 367 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 SLC5A5Q92911 643 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 CALR3Q96L12 384 aaKnown RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 TACO1Q9BSH4 297 aaKnown RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 LRRC4CQ9HCJ2 640 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 DBR1Q9UK59 544 aaKnown RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 ZNF536O15090 1300 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 CCDC169A6NNP5 214 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 NT5DC3Q86UY8 548 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 CCDC63Q8NA47 563 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 C18orf8Q96DM3 657 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 XPO6Q96QU8 1125 aaKnown RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 NACC1Q96RE7 527 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 THAP2Q9H0W7 228 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 ZNF541Q9H0D2 1346 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 ACSL3O95573 720 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 LMNB1P20700 586 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 PSMC2P35998 433 aaKnown RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 SSR1P43307 286 aaKnown RBP11.67□□□□□ -0.54
BRF1-204ENST00000392557 SNX1Q13596 522 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 ANKRD20A8PQ5CZ79 823 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 RNF207Q6ZRF8 634 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 FAM212AQ96EL1 285 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 FAM84AQ96KN4 292 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 GGA3Q9NZ52 723 aa11.67□□□□□ -0.54
BRF1-204ENST00000392557 GSTTP1A0A1W2PQM5 241 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 PEX10O60683 326 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 HOXD13P35453 343 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 KCNJ1P48048 391 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 IFI35P80217 286 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 SEL1L2Q5TEA6 688 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 MCF2L2Q86YR7 1114 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 FUKQ8N0W3 1084 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 UBL4BQ8N7F7 174 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 TRPM4Q8TD43 1214 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 SYTL5Q8TDW5 730 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 ZBED3Q96IU2 234 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 TYW1Q9NV66 732 aaKnown RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 SUCLA2Q9P2R7 463 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 SYNPO2Q9UMS6 1093 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 RIPK3Q9Y572 518 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 COL2A1P02458 1487 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 K7ENM7 598 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 ATMINO43313 823 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 CALCOCO2Q13137 446 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 BAATQ14032 418 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 TRIP13Q15645 432 aaPredicted RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 SNRNP48Q6IEG0 339 aaKnown RBP11.66□□□□□ -0.54
BRF1-204ENST00000392557 LRRC57Q8N9N7 239 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 LPAR1Q92633 364 aa11.66□□□□□ -0.54
BRF1-204ENST00000392557 SGSM3Q96HU1 749 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms