RNA–Protein interactions for RNA: ENST00000392481.6

RFC4-202, Transcript of replication factor C subunit 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFC4, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-202ENST00000392481 KIFC3Q9BVG8 833 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 RNF39Q9H2S5 420 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 UBE2ZQ9H832 354 aaPredicted RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 TLR9Q9NR96 1032 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 PUF60Q9UHX1 559 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 KCNG1Q9UIX4 513 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 RBM19Q9Y4C8 960 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 TTLL13PA6NNM8 815 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 K7ERI5 159 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 ZC3H11AO75152 810 aaKnown RBP eCLIP13.05□□□□□ -0.32
RFC4-202ENST00000392481 NPTXRO95502 500 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 PLCG1P19174 1290 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 PBX3P40426 434 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 NASPP49321 788 aaPredicted RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 KARSQ15046 597 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 TMEM132AQ24JP5 1023 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 CDR2LQ86X02 465 aaPredicted RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 SLC39A11Q8N1S5 342 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 RASSF8Q8NHQ8 419 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 MRPS27Q92552 414 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 PABPC5Q96DU9 382 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 ZNF396Q96N95 335 aaPredicted RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 NTPCRQ9BSD7 190 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 NXF3Q9H4D5 531 aaKnown RBP13.05□□□□□ -0.32
RFC4-202ENST00000392481 PDZD7Q9H5P4 517 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 TMEM134Q9H6X4 195 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 KMT5AQ9NQR1 393 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 BLOC1S4Q9NUP1 217 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 ARHGAP28Q9P2N2 729 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 GIT1Q9Y2X7 761 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 HES2Q9Y543 173 aa13.05□□□□□ -0.32
RFC4-202ENST00000392481 MYH11P35749 1972 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 ZMYM2Q9UBW7 1377 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 DLL1O00548 723 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 CSPG5O95196 566 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 GALTP07902 379 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 ZSCAN22P10073 491 aaPredicted RBP13.04□□□□□ -0.32
RFC4-202ENST00000392481 PLS3P13797 630 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 LIG1P18858 919 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 IRS1P35568 1242 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 AFF1P51825 1210 aaKnown RBP13.04□□□□□ -0.32
RFC4-202ENST00000392481 ERVFC1P60507 584 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 RAD51AP2Q09MP3 1159 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 HYAL1Q12794 435 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 CTC1Q2NKJ3 1217 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 ARSHQ5FYA8 562 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 USP49Q70CQ1 688 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 ZNF280BQ86YH2 543 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 KRI1Q8N9T8 703 aaKnown RBP13.04□□□□□ -0.32
RFC4-202ENST00000392481 MICAL1Q8TDZ2 1067 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 SPIRE2Q8WWL2 714 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 RAD54LQ92698 747 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 TMEM169Q96HH4 297 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 GAD1Q99259 594 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 ADPGKQ9BRR6 497 aa13.04□□□□□ -0.32
RFC4-202ENST00000392481 FSCN2O14926 492 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 POMCP01189 267 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 EDN1P05305 212 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 BMP1P13497 986 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 KCNA5P22460 613 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 DDIT3P35638 169 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 TXLNAP40222 546 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 MLH1P40692 756 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 SMTNP53814 917 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 STK38Q15208 465 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 SPECC1Q5M775 1068 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 NT5DC1Q5TFE4 455 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 ATF7IP2Q5U623 682 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 APBB1IPQ7Z5R6 666 aaPredicted RBP13.03□□□□□ -0.32
RFC4-202ENST00000392481 GPBP1Q86WP2 473 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 CLIC6Q96NY7 704 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 FAM193BQ96PV7 902 aaPredicted RBP13.03□□□□□ -0.32
RFC4-202ENST00000392481 TMEM175Q9BSA9 504 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 APOL6Q9BWW8 343 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 COL25A1Q9BXS0 654 aaPredicted RBP13.03□□□□□ -0.32
RFC4-202ENST00000392481 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 NGRNQ9NPE2 291 aaKnown RBP13.03□□□□□ -0.32
RFC4-202ENST00000392481 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 STK17AQ9UEE5 414 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 CCDC39Q9UFE4 941 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 ODF2LQ9ULJ1 636 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 USP20Q9Y2K6 914 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 MYH15Q9Y2K3 1946 aa13.03□□□□□ -0.32
RFC4-202ENST00000392481 NPHP3-ACAD11A0A0J9YXS1 232 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 NT5C1B-RDH14C9J2C7 533 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 SLC16A4O15374 487 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 B4GALT3O60512 393 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 DDHD2O94830 711 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 YEATS4O95619 227 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 F13A1P00488 732 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 ALDH2P05091 517 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 AKAP5P24588 427 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 SLC11A1P49279 550 aa13.02□□□□□ -0.33
RFC4-202ENST00000392481 KCNQ1P51787 676 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 324.7 ms