RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 NOVP48745 357 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 JAM2P57087 298 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 TOMM20Q15388 145 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 PHLDB3Q6NSJ2 640 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 RINT1Q6NUQ1 792 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 FAM117BQ6P1L5 589 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 TTC27Q6P3X3 843 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 B4GALNT4Q76KP1 1039 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 ARHGEF19Q8IW93 802 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 CDAN1Q8IWY9 1227 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 SYT2Q8N9I0 419 aaPredicted RBP12.43□□□□□ -0.42
CCDC57-205ENST00000392346 TBC1D31Q96DN5 1066 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 THOC1Q96FV9 657 aaKnown RBP12.43□□□□□ -0.42
CCDC57-205ENST00000392346 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 FMO2Q99518 471 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 YIPF2Q9BWQ6 316 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 STXBP5LQ9Y2K9 1186 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 SLX4Q8IY92 1834 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 A0A1W2PRG0 241 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 F5H6K3 240 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 DDX3YO15523 660 aaKnown RBP12.43□□□□□ -0.42
CCDC57-205ENST00000392346 CHN1P15882 459 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 TCF3P15923 654 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 MARSP56192 900 aaKnown RBP12.43□□□□□ -0.42
CCDC57-205ENST00000392346 ICA1Q05084 483 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 KLRC3Q07444 240 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 SNX1Q13596 522 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 MESDQ14696 234 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 FAM133BQ5BKY9 247 aaKnown RBP12.43□□□□□ -0.42
CCDC57-205ENST00000392346 FAM228AQ86W67 206 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 ACTRT1Q8TDG2 376 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 IQCDQ96DY2 449 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 PAGR1Q9BTK6 254 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 EDEM3Q9BZQ6 932 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 RETREG1Q9H6L5 497 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 CHCHD3Q9NX63 227 aaKnown RBP12.43□□□□□ -0.42
CCDC57-205ENST00000392346 AMFRQ9UKV5 643 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 LTBP3Q9NS15 1303 aa12.43□□□□□ -0.42
CCDC57-205ENST00000392346 G3V3G9 751 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 TRAPPC3O43617 180 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 NDUFB10O96000 172 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 STAT1P42224 750 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 GCLMP48507 274 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 SLC29A2Q14542 456 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 HYIQ5T013 277 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 DCAF8Q5TAQ9 597 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 CCDC121Q6ZUS5 278 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 EPM2AIP1Q7L775 607 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 CPLX4Q7Z7G2 160 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 VAV3Q9UKW4 847 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 USP20Q9Y2K6 914 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 MYH11P35749 1972 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 GNA14O95837 355 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 DR1Q01658 176 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 DGKZQ13574 1117 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 FXNQ16595 210 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 EDRF1Q3B7T1 1238 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 CERKLQ49MI3 558 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 PPP1R18Q6NYC8 613 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 DHX38Q92620 1227 aaKnown RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 DDX23Q9BUQ8 820 aaKnown RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 TRIM7Q9C029 511 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 VCPKMTQ9H867 229 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 TRAF3IP3Q9Y228 551 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 UTP11Q9Y3A2 253 aaKnown RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 COL11A2P13942 1736 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 GH2P01242 217 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 KCNA2P16389 499 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 RPA1P27694 616 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 FMO5P49326 533 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 CRY2Q49AN0 593 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 ZNF394Q53GI3 561 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 SWT1Q5T5J6 900 aaKnown RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 FRMD5Q7Z6J6 570 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 CD302Q8IX05 232 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 ZKSCAN4Q969J2 545 aaPredicted RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 HES6Q96HZ4 224 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 KIFC3Q9BVG8 833 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 KLC4Q9NSK0 619 aa12.42□□□□□ -0.42
CCDC57-205ENST00000392346 TYW1Q9NV66 732 aaKnown RBP12.42□□□□□ -0.42
CCDC57-205ENST00000392346 SORBS3O60504 671 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 IL4RP24394 825 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 SOX5P35711 763 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 RPL21P46778 160 aaKnown RBP12.41□□□□□ -0.42
CCDC57-205ENST00000392346 C6orf89Q6UWU4 347 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 TAX1BP1Q86VP1 789 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 CTNNBL1Q8WYA6 563 aaPredicted RBP12.41□□□□□ -0.42
CCDC57-205ENST00000392346 JDP2Q8WYK2 163 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 ATG4AQ8WYN0 398 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 CEP89Q96ST8 783 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 PRMT1Q99873 361 aaKnown RBP12.41□□□□□ -0.42
CCDC57-205ENST00000392346 CTTNBP2NLQ9P2B4 639 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 RNF14Q9UBS8 474 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
CCDC57-205ENST00000392346 HOXA2O43364 376 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 CALUO43852 315 aaPredicted RBP12.41□□□□□ -0.42
CCDC57-205ENST00000392346 FSBPO95073 299 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 CSPG5O95196 566 aa12.41□□□□□ -0.42
CCDC57-205ENST00000392346 ACSL3O95573 720 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms