RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 MCCD1P59942 119 aaPredicted RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 LACTBP83111 547 aaPredicted RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 AMPD3Q01432 767 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 DR1Q01658 176 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 RNASELQ05823 741 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 CHRNDQ07001 517 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 KLC1Q07866 573 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 KCNH2Q12809 1159 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SF3A3Q12874 501 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 LAMB3Q13751 1172 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 KIF22Q14807 665 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 MYBPC3Q14896 1274 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 NONOQ15233 471 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 CHRNA2Q15822 529 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 NFIL3Q16649 462 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 LONRF1Q17RB8 773 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 GNPTABQ3T906 1256 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ZC2HC1CQ53FD0 456 aaPredicted RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ACSBG2Q5FVE4 666 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ARSHQ5FYA8 562 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 FAM47AQ5JRC9 791 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 C12orf60Q5U649 245 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 RNF220Q5VTB9 566 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 GJB7Q6PEY0 223 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 KIF6Q6ZMV9 814 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 C4orf50Q6ZRC1 276 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 C3orf67Q6ZVT6 689 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 TRMT10CQ7L0Y3 403 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SV2BQ7L1I2 683 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 DYMQ7RTS9 669 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ARHGAP22Q7Z5H3 698 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 FRMD5Q7Z6J6 570 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SESTD1Q86VW0 696 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 NCAPG2Q86XI2 1143 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 RELL1Q8IUW5 271 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 NELFCDQ8IXH7 590 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SYCE1Q8N0S2 351 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 PNMA1Q8ND90 353 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SLC17A8Q8NDX2 589 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 LMO3Q8TAP4 145 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ZCRB1Q8TBF4 217 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 TBCKQ8TEA7 893 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 PIGOQ8TEQ8 1089 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 DDX17Q92841 729 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SLC35C1Q96A29 364 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 C18orf8Q96DM3 657 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 PTCD3Q96EY7 689 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 RBM41Q96IZ5 413 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 IFT74Q96LB3 600 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 TSC22D3Q99576 134 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 CCDC28BQ9BUN5 200 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 KIAA1683Q9H0B3 1180 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 CPVLQ9H3G5 476 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 RIOX1Q9H6W3 641 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ZWILCHQ9H900 591 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 TXLNGQ9NUQ3 528 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 USP40Q9NVE5 1235 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 TMEM260Q9NX78 707 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 TAS2R14Q9NYV8 317 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 NINJ2Q9NZG7 142 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 RGL1Q9NZL6 768 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SAMD15Q9P1V8 674 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 CPSF2Q9P2I0 782 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 HSFX1Q9UBD0 423 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ARMCX3Q9UH62 379 aaPredicted RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 LNPEPQ9UIQ6 1025 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 DBR1Q9UK59 544 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 HDAC9Q9UKV0 1011 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ASAP1Q9ULH1 1129 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 UTP11Q9Y3A2 253 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 STARD13Q9Y3M8 1113 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 PCDHGA4Q9Y5G9 962 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 ACTL7BQ9Y614 415 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 BZW2Q9Y6E2 419 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SLC4A7Q9Y6M7 1214 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 SCN9AQ15858 1988 aa3.71□□□□□ -1.82
TRAV39-201ENST00000390466 MYO18AQ92614 2054 aaKnown RBP3.71□□□□□ -1.82
TRAV39-201ENST00000390466 MYO3BQ8WXR4 1341 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 SYNGAP1Q96PV0 1343 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 BTAF1O14981 1849 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 LCTP09848 1927 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 IGKV6D-41A0A0C4DH26 115 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 NPHP3-ACAD11A0A0J9YXS1 232 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TTC36A6NLP5 189 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 EIF4E1BA6NMX2 242 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 TRAF5O00463 557 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 MPHOSPH10O00566 681 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 C2CD2LO14523 706 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 NVLO15381 856 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ATMINO43313 823 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 BUD23O43709 281 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 EDF1O60869 148 aaKnown RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 PPP1R11O60927 126 aaPredicted RBP3.7□□□□□ -1.82
TRAV39-201ENST00000390466 ENTPD5O75356 428 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 AKAP3O75969 853 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 KRT36O76013 467 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 CAMTA2O94983 1202 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 GGPS1O95749 300 aa3.7□□□□□ -1.82
TRAV39-201ENST00000390466 GSTA2P09210 222 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms