RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 MSCO60682 206 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 LRRN2O75325 713 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 F2P00734 622 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 FECHP22830 423 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 MATR3P43243 847 aaKnown RBP eCLIP13.28□□□□□ -0.281e-6■■■■□ 21.3
SPTBN1-203ENST00000389980 ACOT2P49753 483 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 KIF22Q14807 665 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 SEZ6Q53EL9 994 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 ZBTB41Q5SVQ8 909 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 MFSD14CQ5VZR4 134 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 GJB7Q6PEY0 223 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 GBP6Q6ZN66 633 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 LINC01465Q8N7H1 131 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 ZNF397Q8NF99 534 aaPredicted RBP13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 LMBR1Q8WVP7 490 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 GANQ9H2C0 597 aa13.28□□□□□ -0.28
SPTBN1-203ENST00000389980 A0A087WZ62 844 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 INO80B-WBP1J3KQ70 363 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 MAGEB2O15479 319 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 B4GALT5O43286 388 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 PRKCBP05771 671 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 C6orf222P0C671 652 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 IQCF3P0C7M6 154 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 SMIM10L2AP0DMW4 78 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 SMIM10L2BP0DMW5 78 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 GARTP22102 1010 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 GCLMP48507 274 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 CPT1AP50416 773 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 NLRP11P59045 1033 aaKnown RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 CACNB2Q08289 660 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 HIC1Q14526 733 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 FSCN1Q16658 493 aaKnown RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 CYP26C1Q6V0L0 522 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 ZBTB33Q86T24 672 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 CDR2LQ86X02 465 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 ZBTB8OSQ8IWT0 167 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 GPD1LQ8N335 351 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 TSC1Q92574 1164 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 PPP1R13BQ96KQ4 1090 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 FBXL18Q96ME1 805 aa13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 FDXACB1Q9BRP7 624 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 NAA15Q9BXJ9 866 aaKnown RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 INO80BQ9C086 356 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 TOPORSQ9NS56 1045 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 AJAP1Q9UKB5 411 aaPredicted RBP13.27□□□□□ -0.28
SPTBN1-203ENST00000389980 COL1A2P08123 1366 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 A0A0U1RQJ8 604 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 PGK1P00558 417 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 PIGRP01833 764 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 PLEKP08567 350 aaPredicted RBP13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 ABCD1P33897 745 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 EFNA5P52803 228 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 WNT7BP56706 349 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 MYL7Q01449 175 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 MFSD10Q14728 455 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 TSR1Q2NL82 804 aaKnown RBP13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 REM2Q8IYK8 340 aaPredicted RBP13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 ATRIPQ8WXE1 791 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 KCNN1Q92952 543 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 MSTO1Q9BUK6 570 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 IFT122Q9HBG6 1241 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 SIX2Q9NPC8 291 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.27□□□□□ -0.297e-6■■■■■ 74.5
SPTBN1-203ENST00000389980 CEP72Q9P209 647 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 AGO2Q9UKV8 859 aaKnown RBP13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 PPP2R2CQ9Y2T4 447 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 FHOD1Q9Y613 1164 aa13.27□□□□□ -0.29
SPTBN1-203ENST00000389980 CASP8AP2Q9UKL3 1982 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 LRRIQ3A6PVS8 624 aaPredicted RBP13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 CCND3P30281 292 aaPredicted RBP13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 KCNJ6P48051 423 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 PSEN2P49810 448 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 PTENP60484 403 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 ZNF200P98182 395 aaPredicted RBP13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 CYP24A1Q07973 514 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 TMEM62Q0P6H9 643 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 TFDP1Q14186 410 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 MAPK6Q16659 721 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 KLHDC7AQ5VTJ3 777 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 PDXDC1Q6P996 788 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 TRIM65Q6PJ69 517 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 KIAA0319LQ8IZA0 1049 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 ACRBPQ8NEB7 543 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 PARD3BQ8TEW8 1205 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 FAM49AQ9H0Q0 323 aaPredicted RBP13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 STYXL1Q9Y6J8 313 aa13.26□□□□□ -0.29
SPTBN1-203ENST00000389980 MAPK13O15264 365 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 EXTL3O43909 919 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 DUSP11O75319 330 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 DLATP10515 647 aaKnown RBP13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 TNNT1P13805 278 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 UCHL3P15374 230 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 TMOD1P28289 359 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MBTD1Q05BQ5 628 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 MEA1Q16626 185 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 GNASQ5JWF2 1037 aa13.25□□□□□ -0.29
SPTBN1-203ENST00000389980 LMBRD2Q68DH5 695 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms