RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 STK33Q9BYT3 514 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 TRABDQ9H4I3 376 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 TMEM206Q9H813 350 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 OSGEPQ9NPF4 335 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 NDE1Q9NXR1 346 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 BMP3P12645 472 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 EVX2Q03828 476 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 AP3B2Q13367 1082 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 TRPC3Q13507 836 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 QPCTQ16769 361 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 ACCSLQ4AC99 568 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 WDR78Q5VTH9 848 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 RGS9BPQ6ZS82 235 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 ACTRT1Q8TDG2 376 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 CCDC124Q96CT7 223 aaKnown RBP15.2■□□□□ 0.02
RTF1-201ENST00000389629 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 RIMBP3CA6NJZ7 1639 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 RIMBP3BA6NNM3 1639 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 RIMBP3Q9UFD9 1639 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 ZNF263O14978 683 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 HNRNPDLO14979 420 aaKnown RBP15.2■□□□□ 0.02
RTF1-201ENST00000389629 SORBS3O60504 671 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 PGM1P36871 562 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 PAPOLAP51003 745 aaKnown RBP15.2■□□□□ 0.02
RTF1-201ENST00000389629 IZUMO3Q5VZ72 239 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 CHURC1Q8WUH1 139 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 IL17RBQ9NRM6 502 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 MTMR4Q9NYA4 1195 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 MRPL11Q9Y3B7 192 aaKnown RBP15.2■□□□□ 0.02
RTF1-201ENST00000389629 AKAP12Q02952 1782 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 TESPA1A2RU30 521 aaPredicted RBP15.2■□□□□ 0.02
RTF1-201ENST00000389629 GSTA1P08263 222 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 PON1P27169 355 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 MTM1Q13496 603 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 ZBED8Q8IZ13 594 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 NUDT12Q9BQG2 462 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 WDR11Q9BZH6 1224 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 MCM8Q9UJA3 840 aa15.2■□□□□ 0.02
RTF1-201ENST00000389629 EMSYQ7Z589 1322 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 SPECC1L-ADORA2AF8WAN1 911 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 SHOX2O60902 331 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 CDH16O75309 829 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 GHRP10912 638 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 NCF2P19878 526 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 ARL1P40616 181 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 SF3B3Q15393 1217 aaKnown RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 TMC3Q7Z5M5 1100 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 EIF2AK1Q9BQI3 630 aaKnown RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 ANLNQ9NQW6 1124 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 ZCCHC18P0CG32 403 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 FMO5P49326 533 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 KDSRQ06136 332 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 ZC2HC1CQ53FD0 456 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 ZNF662Q6ZS27 426 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 TATDN2Q93075 761 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 ATMINO43313 823 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 LIG4P49917 911 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 KCNJ2P63252 427 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 DMP1Q13316 513 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 WNT8AQ9H1J5 351 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 PPP1R1BQ9UD71 204 aaPredicted RBP15.19■□□□□ 0.02
RTF1-201ENST00000389629 PCDHB4Q9Y5E5 795 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 MARK3P27448 753 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 DDR1Q08345 913 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 FUT2Q10981 343 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 AOC3Q16853 763 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 NME8Q8N427 588 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 FAM20AQ96MK3 541 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 PNMA5Q96PV4 448 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.19■□□□□ 0.02
RTF1-201ENST00000389629 TACC3Q9Y6A5 838 aa15.19■□□□□ 0.02
RTF1-201ENST00000389629 CCDC195A0A1B0GUA6 201 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 H7C0C1 242 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 TMEM253P0C7T8 217 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 ALAS1P13196 640 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CYP11B2P19099 503 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 ATP5OP48047 213 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 EAPPQ56P03 285 aaPredicted RBP15.18■□□□□ 0.02
RTF1-201ENST00000389629 SCYL2Q6P3W7 929 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 THAP2Q9H0W7 228 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 FAM47DPA6NHR8 397 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 NDC80O14777 642 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CFLARO15519 480 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CPA2P48052 419 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CASP4P49662 377 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 MAPK7Q13164 816 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 TRMT10CQ7L0Y3 403 aaKnown RBP15.18■□□□□ 0.02
RTF1-201ENST00000389629 COL23A1Q86Y22 540 aaPredicted RBP15.18■□□□□ 0.02
RTF1-201ENST00000389629 IQCKQ8N0W5 287 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CYP4F11Q9HBI6 524 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 BLOC1S4Q9NUP1 217 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 APEX2Q9UBZ4 518 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 FLT1P17948 1338 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 CYTH3O43739 400 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 ZWINTO95229 277 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 DEUP1Q05D60 604 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 ZNF543Q08ER8 600 aa15.18■□□□□ 0.02
RTF1-201ENST00000389629 FAM182BQ5T319 152 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms