RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 TMEM40Q8WWA1 233 aa6.37□□□□□ -1.39
ERCC4-202ENST00000389138 LRFN3Q9BTN0 628 aa6.37□□□□□ -1.39
ERCC4-202ENST00000389138 B3GNT5Q9BYG0 378 aa6.37□□□□□ -1.39
ERCC4-202ENST00000389138 CCDC68Q9H2F9 335 aa6.37□□□□□ -1.39
ERCC4-202ENST00000389138 TMEM60Q9H2L4 133 aa6.37□□□□□ -1.39
ERCC4-202ENST00000389138 C19orf53Q9UNZ5 99 aaPredicted RBP6.37□□□□□ -1.39
ERCC4-202ENST00000389138 KCNH4Q9UQ05 1017 aa6.37□□□□□ -1.39
ERCC4-202ENST00000389138 INSRP06213 1382 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 CCDC88AQ3V6T2 1871 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 MON2Q7Z3U7 1717 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ITGB4P16144 1822 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 GOSR1O95249 250 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 GUCA1CO95843 209 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ITGAVP06756 1048 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 CLTBP09497 229 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 CCDC175P0C221 793 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 CES1P23141 567 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 AKAP5P24588 427 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 INPP5BP32019 993 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 HOXD13P35453 343 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ANP32AP39687 249 aaKnown RBP6.36□□□□□ -1.39
ERCC4-202ENST00000389138 CLCN2P51788 898 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 SCAND1P57086 179 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 SRSF11Q05519 484 aaKnown RBP6.36□□□□□ -1.39
ERCC4-202ENST00000389138 COX10Q12887 443 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 GAS6Q14393 721 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 WSCD2Q2TBF2 565 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 METTL24Q5JXM2 366 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 LRRTM4Q86VH4 590 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 KIAA0319LQ8IZA0 1049 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ZNF619Q8N2I2 560 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ZNF527Q8NB42 609 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 PPP1R14CQ8TAE6 165 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 GABPB2Q8TAK5 448 aaPredicted RBP6.36□□□□□ -1.39
ERCC4-202ENST00000389138 SLC9A7Q96T83 725 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 DEF6Q9H4E7 631 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 BRD7Q9NPI1 651 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.36□□□□□ -1.39
ERCC4-202ENST00000389138 SUSD2Q9UGT4 822 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 ZNF711Q9Y462 761 aa6.36□□□□□ -1.39
ERCC4-202ENST00000389138 DCDC2BA2VCK2 349 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 METTL12A8MUP2 240 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 AGRPO00253 132 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 PLOD2O00469 737 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 USP2O75604 605 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 GLRX3O76003 335 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 IL2RBP14784 551 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 VCAM1P19320 739 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 BTF3P20290 206 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 HOXC12P31275 282 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 PMS1P54277 932 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 SURF1Q15526 300 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 RFX8Q6ZV50 586 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CPOQ8IVL8 374 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 ITFG2Q969R8 447 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 GAL3ST3Q96A11 431 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 PI4K2AQ9BTU6 479 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 POLR3CQ9BUI4 534 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 STARD7Q9NQZ5 370 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 ABI2Q9NYB9 513 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 APEX2Q9UBZ4 518 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 SERPINB13Q9UIV8 391 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CCNL1Q9UK58 526 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 DENND2AQ9ULE3 1009 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CORO2BQ9UQ03 480 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 FNDC3AQ9Y2H6 1198 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 FAM25EA8MYX2 175 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 INO80B-WBP1J3KQ70 363 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 HOXC11O43248 304 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 APBB3O95704 486 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 NOP2P46087 812 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CDK8P49336 464 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 MCM2P49736 904 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CSE1LP55060 971 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 IL1RL1Q01638 556 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 MRPL28Q13084 256 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 ZNF423Q2M1K9 1284 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 DARS2Q6PI48 645 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 KIAA1211Q6ZU35 1233 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 GSDMBQ8TAX9 411 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 ZNF606Q8WXB4 792 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 JADE3Q92613 823 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 FRAT1Q92837 279 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CNTNAP3BQ96NU0 1288 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 CNTNAP3Q9BZ76 1288 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 LIN7BQ9HAP6 207 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 XAB2Q9HCS7 855 aaKnown RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 FAM86C1Q9NVL1 165 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 TMOD4Q9NZQ9 345 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 MTF2Q9Y483 593 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 SLC12A7Q9Y666 1083 aa6.35□□□□□ -1.39
ERCC4-202ENST00000389138 EPN1Q9Y6I3 576 aaPredicted RBP6.35□□□□□ -1.39
ERCC4-202ENST00000389138 MAP2P11137 1827 aaKnown RBP6.34□□□□□ -1.39
ERCC4-202ENST00000389138 FYB1O15117 783 aa6.34□□□□□ -1.39
ERCC4-202ENST00000389138 BMP4P12644 408 aa6.34□□□□□ -1.39
ERCC4-202ENST00000389138 BMP6P22004 513 aa6.34□□□□□ -1.39
ERCC4-202ENST00000389138 GPR3P46089 330 aa6.34□□□□□ -1.39
ERCC4-202ENST00000389138 ARL4CP56559 192 aa6.34□□□□□ -1.39
ERCC4-202ENST00000389138 NLRP12P59046 1061 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms