RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 FOXE3Q13461 319 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 ADRM1Q16186 407 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 MST1LQ2TV78 715 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 FKBP15Q5T1M5 1219 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 RNF207Q6ZRF8 634 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 Q8N1X5 172 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 GPR156Q8NFN8 814 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 OR52N2Q8NGI0 321 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 IL17DQ8TAD2 202 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 CACTINQ8WUQ7 758 aaKnown RBP3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 AHCYL2Q96HN2 611 aaKnown RBP3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 ZNF747Q9BV97 191 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 GREM2Q9H772 168 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 IFT122Q9HBG6 1241 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 CCM2LQ9NUG4 571 aaPredicted RBP3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 C14orf119Q9NWQ9 140 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 SLC5A4Q9NY91 659 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 FAM30AQ9NZY2 134 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 CEP72Q9P209 647 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 TRPS1Q9UHF7 1281 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 GIT1Q9Y2X7 761 aa3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 FNDC1Q4ZHG4 1894 aaPredicted RBP3.22□□□□□ -1.89
RNU6-541P-201ENST00000384709 XDHP47989 1333 aa3.21□□□□□ -1.89
RNU6-541P-201ENST00000384709 RPTORQ8N122 1335 aa3.21□□□□□ -1.89
RNU6-541P-201ENST00000384709 CAPN14A8MX76 684 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 ALG1L2C9J202 215 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 OVOL3O00110 214 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 STC2O76061 302 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 IPO13O94829 963 aaKnown RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 CDK11BP21127 795 aaKnown RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 AGXTP21549 392 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 HIBADHP31937 336 aaKnown RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 MCAMP43121 646 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 GZMKP49863 264 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 CDKN1CP49918 316 aaPredicted RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 SLC5A3P53794 718 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 HHEXQ03014 270 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 PPP3CAQ08209 521 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 RRP1BQ14684 758 aaKnown RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 KRT40Q6A162 431 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 DRICH1Q6PGQ1 229 aaPredicted RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 SPRED1Q7Z699 444 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 CNTD1Q8N815 330 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 GLB1L3Q8NCI6 653 aaPredicted RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 ATL2Q8NHH9 583 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 SH3RF3Q8TEJ3 882 aaPredicted RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 IL17RAQ96F46 866 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 LSM14BQ9BX40 385 aaKnown RBP3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 BCO1Q9HAY6 547 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 DPP7Q9UHL4 492 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 RCAN3Q9UKA8 241 aa3.21□□□□□ -1.9
RNU6-541P-201ENST00000384709 WASHC2CQ9Y4E1 1318 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 PJA2O43164 708 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 CFBP00751 764 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 RBP3P10745 1247 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 ACVRL1P37023 503 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 CASRP41180 1078 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 FLT3LGP49771 235 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 DUSP2Q05923 314 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 MGAT2Q10469 447 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 MALLQ13021 153 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 TOB2Q14106 344 aaPredicted RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 ELAVL1Q15717 326 aaKnown RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 CSRP2Q16527 193 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 USP39Q53GS9 565 aaKnown RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 FAM47AQ5JRC9 791 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 Q6ZRM9 215 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 Q6ZVL8 140 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 ZNF572Q7Z3I7 529 aaPredicted RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 FAM83AQ86UY5 434 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 SGMS1Q86VZ5 419 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 PALM2Q8IXS6 379 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 C1orf162Q8NEQ5 155 aaPredicted RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 OR7D4Q8NG98 312 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 COG1Q8WTW3 980 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 ZNF480Q8WV37 535 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 RIN2Q8WYP3 895 aaPredicted RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 ST8SIA2Q92186 375 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 EXTL1Q92935 676 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 TMEM176AQ96HP8 235 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 MNTQ99583 582 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 SLC13A1Q9BZW2 595 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 KCNH6Q9H252 994 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 PCDH12Q9NPG4 1184 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 RBM12Q9NTZ6 932 aaKnown RBP3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 GPRC5DQ9NZD1 345 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 EDARQ9UNE0 448 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 CLCA2Q9UQC9 943 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 ATRNL1Q5VV63 1379 aa3.2□□□□□ -1.9
RNU6-541P-201ENST00000384709 WASHC2AQ641Q2 1341 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 GOLGA6L6A8MZA4 724 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 GABRDO14764 452 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 ITGA10O75578 1167 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 GUCY1A2P33402 732 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 MAN2A2P49641 1150 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SCNN1GP51170 649 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SCAND1P57086 179 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SRSF2Q01130 221 aaKnown RBP3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 APBA1Q02410 837 aa3.19□□□□□ -1.9
RNU6-541P-201ENST00000384709 SP140Q13342 867 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms