RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 FXR2P51116 673 aaKnown RBP eCLIP18.27■□□□□ 0.52
SGCB-201ENST00000381431 NPEPPSP55786 919 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 KRT17Q04695 432 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 NFIAQ12857 509 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 PDIA2Q13087 525 aaKnown RBP18.27■□□□□ 0.52
SGCB-201ENST00000381431 MTM1Q13496 603 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 TFDP2Q14188 446 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 RBBP5Q15291 538 aaKnown RBP18.27■□□□□ 0.52
SGCB-201ENST00000381431 STRIP1Q5VSL9 837 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 SLC9A2Q9UBY0 812 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 COPEO14579 308 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 ATMINO43313 823 aaPredicted RBP18.27■□□□□ 0.52
SGCB-201ENST00000381431 SPAG7O75391 227 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 PLA2G4FQ68DD2 849 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 SRLQ86TD4 932 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 GPD1LQ8N335 351 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 LRRN4CLQ8ND94 238 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 CPA5Q8WXQ8 436 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 ZIM3Q96PE6 472 aa18.27■□□□□ 0.52
SGCB-201ENST00000381431 TPX2Q9ULW0 747 aaKnown RBP18.27■□□□□ 0.52
SGCB-201ENST00000381431 ZBTB7AO95365 584 aa18.27■□□□□ 0.51
SGCB-201ENST00000381431 CALB1P05937 261 aa18.27■□□□□ 0.51
SGCB-201ENST00000381431 PPP4CP60510 307 aa18.27■□□□□ 0.51
SGCB-201ENST00000381431 SPOPLQ6IQ16 392 aa18.27■□□□□ 0.51
SGCB-201ENST00000381431 GBP7Q8N8V2 638 aaPredicted RBP18.27■□□□□ 0.51
SGCB-201ENST00000381431 FAM118BQ9BPY3 351 aa18.27■□□□□ 0.51
SGCB-201ENST00000381431 KBTBD4Q9NVX7 518 aa18.27■□□□□ 0.51
SGCB-201ENST00000381431 DMGDHQ9UI17 866 aaKnown RBP18.27■□□□□ 0.51
SGCB-201ENST00000381431 RSPH10B2B2RC85 870 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 CHUKO15111 745 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 RSPH10BP0C881 870 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 PRPSAP1Q14558 356 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 TMEM143Q96AN5 459 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 CCT8L2Q96SF2 557 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 CYTH2Q99418 400 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 FBXO28Q9NVF7 368 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 INPP5FQ9Y2H2 1132 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 USP32Q8NFA0 1604 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 CFLARO15519 480 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 TFRCP02786 760 aaKnown RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 H2AFXP16104 143 aaPredicted RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 N4BP2L2Q92802 583 aaPredicted RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 TRIM55Q9BYV6 548 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 FAM217BQ9NTX9 383 aaPredicted RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 CYP11B2P19099 503 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 ZC3H18Q86VM9 953 aaKnown RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 DEPDC1BQ8WUY9 529 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 ESYT2A0FGR8 921 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 SMIM22K7EJ46 135 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 RTN2O75298 545 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 MDH1P40925 334 aaKnown RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 DHX34Q14147 1143 aaKnown RBP18.26■□□□□ 0.51
SGCB-201ENST00000381431 ICE2Q659A1 982 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 AP5M1Q9H0R1 490 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 ALG6Q9Y672 507 aa18.26■□□□□ 0.51
SGCB-201ENST00000381431 TBX3O15119 743 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 OATP04181 439 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 RFX1P22670 979 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 IRAK1P51617 712 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 SYCP2LQ5T4T6 812 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 KLHDC7AQ5VTJ3 777 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 SYT2Q8N9I0 419 aaPredicted RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 TGS1Q96RS0 853 aaKnown RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 PMS1P54277 932 aaKnown RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 MYLK4Q86YV6 388 aaPredicted RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 PPWD1Q96BP3 646 aaKnown RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 KLC2Q9H0B6 622 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 ETNK1Q9HBU6 452 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 ALG13Q9NP73 1137 aaKnown RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 KDM6AO15550 1401 aaPredicted RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 PHF20L1A8MW92 1017 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 MTMR2Q13614 643 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 SEPT6Q14141 434 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 SNRNP35Q16560 246 aaKnown RBP18.25■□□□□ 0.51
SGCB-201ENST00000381431 CDKAL1Q5VV42 579 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 TTC13Q8NBP0 860 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 RNF149Q8NC42 400 aa18.25■□□□□ 0.51
SGCB-201ENST00000381431 TCRBV5S4A2TA0A5A2 114 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 M0QYV0 167 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 SLC16A3O15427 465 aaKnown RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 TBXAS1P24557 533 aaPredicted RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 IREB2P48200 963 aaKnown RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 JADE1Q6IE81 842 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 HHIPL2Q6UWX4 724 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 LUC7L3O95232 432 aaKnown RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 WDR72Q3MJ13 1102 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 FAM102AQ5T9C2 384 aaPredicted RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 ACAD9Q9H845 621 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 DBR1Q9UK59 544 aaKnown RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 A0A1W2PQJ5 194 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 WTIPA6NIX2 430 aaPredicted RBP18.24■□□□□ 0.51
SGCB-201ENST00000381431 ARSEP51690 589 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 CAV1Q03135 178 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 DNAAF5Q86Y56 855 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 SEMA6BQ9H3T3 888 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 FBXO40Q9UH90 709 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 GOLGA8RI6L899 631 aa18.24■□□□□ 0.51
SGCB-201ENST00000381431 GPC3P51654 580 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms