RNA–Protein interactions for RNA: ENST00000379663.7

EXOSC9-202, Transcript of exosome component 9, humanhuman

TSL 1 (best) BASIC

Gene EXOSC9, Length 1,529 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-202ENST00000379663 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 DRC7Q8IY82 874 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 ZSWIM2Q8NEG5 633 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 SH3TC2Q8TF17 1288 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 PRIMPOLQ96LW4 560 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 FDXACB1Q9BRP7 624 aaPredicted RBP13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 TSEN34Q9BSV6 310 aaKnown RBP13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 HAPLN2Q9GZV7 340 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 ADAMTS10Q9H324 1103 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 CNTNAP2Q9UHC6 1331 aa13.09□□□□□ -0.31
EXOSC9-202ENST00000379663 FAM189A1O60320 539 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 TOM1L1O75674 476 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 ADRB2P07550 413 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 ACLYP53396 1101 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 CHMP4BP1P59074 171 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 ZNF200P98182 395 aaPredicted RBP13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 BFSP1Q12934 665 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 SLFN12LQ6IEE8 588 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 TAF2Q6P1X5 1199 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 TSHZ1Q6ZSZ6 1077 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 INTS8Q75QN2 995 aaKnown RBP13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 SRGAP1Q7Z6B7 1085 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 ZNF710Q8N1W2 664 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 GPD1LQ8N335 351 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 POMGNT1Q8WZA1 660 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 BICD1Q96G01 975 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 ACO2Q99798 780 aaKnown RBP13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 TARS2Q9BW92 718 aaKnown RBP13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 TTYH3Q9C0H2 523 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 PCIF1Q9H4Z3 704 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 PTPRHQ9HD43 1115 aa13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 PRMT7Q9NVM4 692 aaPredicted RBP13.08□□□□□ -0.31
EXOSC9-202ENST00000379663 A0A0B4J269 797 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 INO80B-WBP1J3KQ70 363 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 GSDMDP57764 484 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 NLRP11P59045 1033 aaKnown RBP13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 KCNH2Q12809 1159 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 SNRNP35Q16560 246 aaKnown RBP13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 GDF6Q6KF10 455 aaPredicted RBP13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 CCDC186Q7Z3E2 898 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 RPAINQ86UA6 219 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 SERINC5Q86VE9 423 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 DNAJB3Q8WWF6 145 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 ZNF668Q96K58 619 aaPredicted RBP13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 INO80BQ9C086 356 aaPredicted RBP13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 UNC93B1Q9H1C4 597 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 SIK3Q9Y2K2 1263 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 USP20Q9Y2K6 914 aa13.08□□□□□ -0.32
EXOSC9-202ENST00000379663 GTPBP10A4D1E9 387 aaKnown RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 EXTL3O43909 919 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 AFPP02771 609 aaKnown RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 GYPCP04921 128 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 PTPN11Q06124 597 aaPredicted RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 MCL1Q07820 350 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 PCBP1Q15365 356 aaKnown RBP eCLIP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 SYCP1Q15431 976 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 KIZQ2M2Z5 673 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 SLC9C1Q4G0N8 1177 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 FIGNQ5HY92 759 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 FKBP15Q5T1M5 1219 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 CRELD2Q6UXH1 353 aaPredicted RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 CBWD2Q8IUF1 395 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 NME8Q8N427 588 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 PLEKHO2Q8TD55 490 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 NLRP7Q8WX94 980 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 SAAL1Q96ER3 474 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 ZBTB45Q96K62 511 aaPredicted RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 MFSD14AQ96MC6 490 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 FAM49AQ9H0Q0 323 aaPredicted RBP13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 KIAA1586Q9HCI6 787 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 PHF24Q9UPV7 400 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 TNFSF13BQ9Y275 285 aa13.07□□□□□ -0.32
EXOSC9-202ENST00000379663 CLDN3O15551 220 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 B4GALT5O43286 388 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 GALR2O43603 387 aaPredicted RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 LDHAP00338 332 aaKnown RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 RPLP2P05387 115 aaKnown RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 PTMAP06454 111 aaKnown RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 KCNMA1Q12791 1236 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 PRPF4BQ13523 1007 aaKnown RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 TRIM14Q14142 442 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 DCAF17Q5H9S7 520 aaPredicted RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 C1orf220Q5T0J3 134 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 ATF7IP2Q5U623 682 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 MPZL3Q6UWV2 235 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 SLC43A3Q8NBI5 491 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 ARRDC4Q8NCT1 418 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 PPP1R16BQ96T49 567 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 KCNF1Q9H3M0 494 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 ANKFY1Q9P2R3 1169 aa13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 AGO2Q9UKV8 859 aaKnown RBP13.06□□□□□ -0.32
EXOSC9-202ENST00000379663 A0A1W2PQ45 241 aaPredicted RBP13.05□□□□□ -0.32
EXOSC9-202ENST00000379663 A0A1W2PQY0 241 aa13.05□□□□□ -0.32
EXOSC9-202ENST00000379663 GOLGA8IPA6NC78 632 aa13.05□□□□□ -0.32
EXOSC9-202ENST00000379663 GOLGA8JA6NMD2 632 aa13.05□□□□□ -0.32
EXOSC9-202ENST00000379663 PES1O00541 588 aaKnown RBP13.05□□□□□ -0.32
EXOSC9-202ENST00000379663 TSPAN1O60635 241 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms