RNA–Protein interactions for RNA: ENST00000379237.6

USP6NL-202, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP6NL, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-202ENST00000379237 CCR3P51677 355 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 PDE1BQ01064 536 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 RBM44Q6ZP01 1051 aaKnown RBP11.66□□□□□ -0.54
USP6NL-202ENST00000379237 C4orf50Q6ZRC1 276 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 TTC17Q96AE7 1141 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 OCEL1Q9H607 264 aa11.66□□□□□ -0.54
USP6NL-202ENST00000379237 MCF2LO15068 1137 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 MAP3K13O43283 966 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 GJB6O95452 261 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 PIK3CAP42336 1068 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 TNNI2P48788 182 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 PTENP60484 403 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 KRT81Q14533 505 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 CALCRLQ16602 461 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 RFWD3Q6PCD5 774 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 NCCRP1Q6ZVX7 275 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 SLC35G2Q8TBE7 412 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 C1orf54Q8WWF1 131 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 CFAP57Q96MR6 1250 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 NRKQ7Z2Y5 1582 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 STRNO43815 780 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 RPL21P46778 160 aaKnown RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 TMEM62Q0P6H9 643 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 DSTYKQ6XUX3 929 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 WDR75Q8IWA0 830 aaKnown RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 SIK3Q9Y2K2 1263 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 KDM1AO60341 852 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 TBCAO75347 108 aaKnown RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 PENKP01210 267 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 GNAZP19086 355 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 PHKA1P46020 1223 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 ESRRGP62508 458 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 ZC2HC1CQ53FD0 456 aaPredicted RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 MAP3K21Q5TCX8 1036 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 IYDQ6PHW0 289 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 TSHZ1Q6ZSZ6 1077 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 UNC13DQ70J99 1090 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 GUF1Q8N442 669 aaKnown RBP11.65□□□□□ -0.54
USP6NL-202ENST00000379237 GRK7Q8WTQ7 553 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 SEMA6BQ9H3T3 888 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 CIDEBQ9UHD4 219 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 DOLKQ9UPQ8 538 aa11.65□□□□□ -0.54
USP6NL-202ENST00000379237 SMIM31A0A1B0GVY4 71 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 DDX3XO00571 662 aaKnown RBP eCLIP11.65□□□□□ -0.55
USP6NL-202ENST00000379237 LRRN2O75325 713 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 IFNB1P01574 187 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 GNA11P29992 359 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 HNRNPH3P31942 346 aaKnown RBP11.65□□□□□ -0.55
USP6NL-202ENST00000379237 PSMC1P62191 440 aaKnown RBP11.65□□□□□ -0.55
USP6NL-202ENST00000379237 OCRLQ01968 901 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 CNGA3Q16281 694 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 OR52E8Q6IFG1 317 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 ATP8B4Q8TF62 1192 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 AK8Q96MA6 479 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 GRIP2Q9C0E4 1043 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 SAYSD1Q9NPB0 183 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 GCNT4Q9P109 453 aa11.65□□□□□ -0.55
USP6NL-202ENST00000379237 BAZ2BQ9UIF8 2168 aaKnown RBP11.64□□□□□ -0.55
USP6NL-202ENST00000379237 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 KRT17Q04695 432 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ACAP1Q15027 740 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 RNF207Q6ZRF8 634 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 USP6NLQ92738 828 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 BARX2Q9UMQ3 279 aaPredicted RBP11.64□□□□□ -0.55
USP6NL-202ENST00000379237 PCDHA4Q9UN74 947 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ZFYVE16Q7Z3T8 1539 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ZBED4O75132 1171 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 EIF2B2P49770 351 aaKnown RBP11.64□□□□□ -0.55
USP6NL-202ENST00000379237 CCNG1P51959 295 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 SATL1Q86VE3 508 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 RFFLQ8WZ73 363 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ATP6V0A1Q93050 837 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 THAP11Q96EK4 314 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 AGBL1Q96MI9 1066 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ECSITQ9BQ95 431 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 MRPL1Q9BYD6 325 aaKnown RBP11.64□□□□□ -0.55
USP6NL-202ENST00000379237 OSGEPQ9NPF4 335 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 PHF8Q9UPP1 1060 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 PTPRMP28827 1452 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 GOLGA8RI6L899 631 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 CES2O00748 559 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 WNT7AO00755 349 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 S100BP04271 92 aaPredicted RBP11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ASLP04424 464 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 DLATP10515 647 aaKnown RBP11.64□□□□□ -0.55
USP6NL-202ENST00000379237 VCAM1P19320 739 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 SPDYCQ5MJ68 293 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 KRT80Q6KB66 452 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 SH3TC2Q8TF17 1288 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 LRGUKQ96M69 825 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 ITGB1BP2Q9UKP3 347 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 CPS1P31327 1500 aa11.64□□□□□ -0.55
USP6NL-202ENST00000379237 TBX10O75333 385 aa11.63□□□□□ -0.55
USP6NL-202ENST00000379237 KITP10721 976 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms