RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 HNRNPDLO14979 420 aaKnown RBP21.08■□□□□ 0.97
SSU72-204ENST00000378726 ZNF157P51786 506 aaPredicted RBP21.08■□□□□ 0.97
SSU72-204ENST00000378726 CASP8Q14790 479 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 ASIC2Q16515 512 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 SNRNP35Q16560 246 aaKnown RBP21.08■□□□□ 0.97
SSU72-204ENST00000378726 GJB7Q6PEY0 223 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 CBWD2Q8IUF1 395 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 JAKMIP2Q96AA8 810 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 LACRTQ9GZZ8 138 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 VTA1Q9NP79 307 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 HDAC6Q9UBN7 1215 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 PCDHA13Q9Y5I0 950 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 EMSYQ7Z589 1322 aa21.08■□□□□ 0.97
SSU72-204ENST00000378726 ENC1O14682 589 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 MYL7Q01449 175 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 TRAPPC11Q7Z392 1133 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 PLEKHH3Q7Z736 793 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 ZNF467Q7Z7K2 595 aaPredicted RBP21.08■□□□□ 0.96
SSU72-204ENST00000378726 MSL3Q8N5Y2 521 aaKnown RBP21.08■□□□□ 0.96
SSU72-204ENST00000378726 DEPTORQ8TB45 409 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 PLEKHO2Q8TD55 490 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 ATP8B4Q8TF62 1192 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 SMARCAD1Q9H4L7 1026 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.08■□□□□ 0.96
SSU72-204ENST00000378726 FAN1Q9Y2M0 1017 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 PPME1Q9Y570 386 aa21.08■□□□□ 0.96
SSU72-204ENST00000378726 K7ERI5 159 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 TULP1O00294 542 aaPredicted RBP21.07■□□□□ 0.96
SSU72-204ENST00000378726 KRT86O43790 486 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 ADRB2P07550 413 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 PPP3CAQ08209 521 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 KLHL30Q0D2K2 578 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 STRN3Q13033 797 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 LAMC2Q13753 1193 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 GRB14Q14449 540 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 PLCB4Q15147 1175 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 ENOX2Q16206 610 aaKnown RBP21.07■□□□□ 0.96
SSU72-204ENST00000378726 C1orf220Q5T0J3 134 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 IRF2BP2Q7Z5L9 587 aa21.07■□□□□ 0.96
SSU72-204ENST00000378726 GCLMP48507 274 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 VAV2P52735 878 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 GFPT1Q06210 699 aaPredicted RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 DRP2Q13474 957 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 GJC2Q5T442 439 aaPredicted RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 IQCEQ6IPM2 695 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 EHBP1Q8NDI1 1231 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 IFIH1Q9BYX4 1025 aaKnown RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 AJAP1Q9UKB5 411 aaPredicted RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 LRRIQ3A6PVS8 624 aaPredicted RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 SNAI1O95863 264 aaPredicted RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 GARTP22102 1010 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 MAPK4P31152 587 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 SLC26A2P50443 739 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 ARHGAP1Q07960 439 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 CETN1Q12798 172 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 KIF5AQ12840 1032 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 MAMDC4Q6UXC1 1216 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 PRPF31Q8WWY3 499 aaKnown RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 FBXL18Q96ME1 805 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 INTS2Q9H0H0 1204 aaKnown RBP21.06■□□□□ 0.96
SSU72-204ENST00000378726 TSPYL1Q9H0U9 437 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 CPA4Q9UI42 421 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 USP20Q9Y2K6 914 aa21.06■□□□□ 0.96
SSU72-204ENST00000378726 RBM47A0AV96 593 aaKnown RBP21.05■□□□□ 0.96
SSU72-204ENST00000378726 SCP2P22307 547 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 MAGEA1P43355 309 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 LIG4P49917 911 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 KCNN1Q92952 543 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 DUSP10Q9Y6W6 482 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 ZBTB42B2RXF5 422 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 P4HA2O15460 535 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 ATP1A1P05023 1023 aaKnown RBP21.05■□□□□ 0.96
SSU72-204ENST00000378726 ADCYAP1R1P41586 468 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 JAM2P57087 298 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 MCCD1P59942 119 aaPredicted RBP21.05■□□□□ 0.96
SSU72-204ENST00000378726 IER5Q5VY09 327 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 RASAL3Q86YV0 1011 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 LMO3Q8TAP4 145 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 CCDC127Q96BQ5 260 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 MAML3Q96JK9 1138 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 KATNBL1Q9H079 304 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 DNAJC12Q9UKB3 198 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 TRPC6Q9Y210 931 aa21.05■□□□□ 0.96
SSU72-204ENST00000378726 SRGAP2O75044 1071 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 GH1P01241 217 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 CAPSQ13938 189 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 WDR93Q6P2C0 686 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 EXOC8Q8IYI6 725 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 GPD1LQ8N335 351 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 PARD3BQ8TEW8 1205 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 MFSD14AQ96MC6 490 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.04■□□□□ 0.96
SSU72-204ENST00000378726 STK33Q9BYT3 514 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 RNF216Q9NWF9 866 aaPredicted RBP21.04■□□□□ 0.96
SSU72-204ENST00000378726 BZW2Q9Y6E2 419 aaKnown RBP21.04■□□□□ 0.96
SSU72-204ENST00000378726 IGF2BP3O00425 579 aaKnown RBP eCLIP21.04■□□□□ 0.962e-6■□□□□ 8.4
SSU72-204ENST00000378726 ECM2O94769 699 aaPredicted RBP21.04■□□□□ 0.96
SSU72-204ENST00000378726 ACTN2P35609 894 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 MMS19Q96T76 1030 aa21.04■□□□□ 0.96
SSU72-204ENST00000378726 TMEM134Q9H6X4 195 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms