RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 P4HA2O15460 535 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 CPP00450 1065 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 YWHABP31946 246 aaKnown RBP21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 PEX3P56589 373 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 MTMR1Q13613 665 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 TTC31Q49AM3 519 aaPredicted RBP21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 PLA2G4FQ68DD2 849 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 TMEM174Q8WUU8 243 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 CNOT8Q9UFF9 292 aaKnown RBP21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 ATP8A1Q9Y2Q0 1164 aa21.05■□□□□ 0.96
SHROOM1-202ENST00000378676 GOLGA6L10A0A0M3HER8 536 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 PPFIA2O75334 1257 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 EIF2AK2P19525 551 aaKnown RBP21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 CETN1Q12798 172 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 BIRC3Q13489 604 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 PCNX4Q63HM2 1172 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 JAMLQ86YT9 394 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 ZDHHC14Q8IZN3 488 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 LARGE2Q8N3Y3 721 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 SYTL5Q8TDW5 730 aaPredicted RBP21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 C18orf8Q96DM3 657 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 ZSWIM1Q9BR11 485 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 ERP44Q9BS26 406 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 RAVER2Q9HCJ3 691 aaKnown RBP21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 GPC5P78333 572 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 MAP2K1Q02750 393 aaPredicted RBP21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 AGBL2Q5U5Z8 902 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 RUFY4Q6ZNE9 571 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 CBWD2Q8IUF1 395 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 MICALL1Q8N3F8 863 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 SEMA4DQ92854 862 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 TAAR1Q96RJ0 339 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 CCT8L2Q96SF2 557 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 NAP1L3Q99457 506 aaPredicted RBP21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 EPB41L4BQ9H329 900 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 NOVA2Q9UNW9 492 aaKnown RBP21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 PFASO15067 1338 aa21.04■□□□□ 0.96
SHROOM1-202ENST00000378676 ANKRD63C9JTQ0 380 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 TULP1O00294 542 aaPredicted RBP21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 LYPLA2O95372 231 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 ASNSP08243 561 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 NCKAP1LP55160 1127 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 MESDQ14696 234 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 TCEAL1Q15170 157 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 KIFC3Q9BVG8 833 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 SYNGAP1Q96PV0 1343 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 COL11A1P12107 1806 aaPredicted RBP21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 E7EVH7 732 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 ATP9AO75110 1047 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 RTN2O75298 545 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 COMTP21964 271 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 TMOD1P28289 359 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 PTGIRP43119 386 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 KRT71Q3SY84 523 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 ZDHHC24Q6UX98 284 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 SLC47A2Q86VL8 602 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 ARFGAP2Q8N6H7 521 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 PRELID2Q8N945 189 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 ELMO3Q96BJ8 720 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 SAAL1Q96ER3 474 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 ST6GALNAC4Q9H4F1 302 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 PPANQ9NQ55 473 aaKnown RBP21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 SNX24Q9Y343 169 aa21.03■□□□□ 0.96
SHROOM1-202ENST00000378676 FAM187AA6NFU0 413 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 CYP26A1O43174 497 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 PHF2O75151 1096 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 ADSSP30520 456 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 GHRHRQ02643 423 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 FKBP1CQ5VVH2 108 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 TTC27Q6P3X3 843 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 B4GALNT4Q76KP1 1039 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 FAM83AQ86UY5 434 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 FAM71AQ8IYT1 594 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 PPM1KQ8N3J5 372 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 BTBD6Q96KE9 485 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 MIF4GDA9UHW6 222 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 KIAA0391O15091 583 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 CCNE2O96020 404 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 MMEP08473 750 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 PEX5P50542 639 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 DHX34Q14147 1143 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 PRPF38AQ8NAV1 312 aaKnown RBP21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 VTI1AQ96AJ9 217 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 PAGR1Q9BTK6 254 aa21.02■□□□□ 0.96
SHROOM1-202ENST00000378676 ATXN2Q99700 1313 aaKnown RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 MAPK13O15264 365 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 SHBGP04278 402 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 PPP2R2AP63151 447 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 FMO1Q01740 532 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 PGM5Q15124 567 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 PPP2R5EQ16537 467 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 NBPF9Q3BBW0 867 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 FAM102BQ5T8I3 360 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 UBL4BQ8N7F7 174 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 KAT2BQ92831 832 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 TOPORSQ9NS56 1045 aaPredicted RBP21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 GRHL1Q9NZI5 618 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 TCRBV7S2A1N4TA0A589 114 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 FAM107AO95990 144 aa21.01■□□□□ 0.95
SHROOM1-202ENST00000378676 MYCLP12524 364 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms