RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 CNTNAP2Q9UHC6 1331 aa12.88□□□□□ -0.35
DEPDC4-202ENST00000378244 EYSQ5T1H1 3165 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 LCHNA4D1U4 455 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 GTPBP6O43824 516 aaPredicted RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 PRPF6O94906 941 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 MATR3P43243 847 aaKnown RBP eCLIP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 SARSP49591 514 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 OSTNP61366 133 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 KMT5BQ4FZB7 885 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 FAM26FQ5R3K3 315 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 UBXN11Q5T124 520 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 ISM2Q6H9L7 571 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 CCDC34Q96HJ3 373 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 MRPL4Q9BYD3 311 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 RNF39Q9H2S5 420 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 NXF3Q9H4D5 531 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 PDZD7Q9H5P4 517 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 TMEM134Q9H6X4 195 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 OLFML3Q9NRN5 406 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 SEL1LQ9UBV2 794 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 RPN1P04843 607 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 AKAP5P24588 427 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 DPYDQ12882 1025 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 PCBP1Q15365 356 aaKnown RBP eCLIP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 FAM187BQ17R55 369 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 SEZ6Q53EL9 994 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 HABP4Q5JVS0 413 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 KANK3Q6NY19 840 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 SLC27A1Q6PCB7 646 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 PPP4R3CPQ6ZMV5 832 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 ECHDC2Q86YB7 292 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 C1orf112Q9NSG2 853 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 EXOC1Q9NV70 894 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 MTUS1Q9ULD2 1270 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 MAPK8IP1Q9UQF2 711 aa12.87□□□□□ -0.35
DEPDC4-202ENST00000378244 MYH11P35749 1972 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 KLRC4O43908 158 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 CA3P07451 260 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 ATF7P17544 494 aaPredicted RBP12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 AXLP30530 894 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 LIG4P49917 911 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 GTF2BQ00403 316 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 STK4Q13043 487 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 ZNF568Q3ZCX4 644 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 SPRED2Q7Z698 418 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 NELFCDQ8IXH7 590 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 SYCP3Q8IZU3 236 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 CEP120Q8N960 986 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 PHOSPHO2Q8TCD6 241 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 ADPGKQ9BRR6 497 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 INPP5FQ9Y2H2 1132 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 YBX2Q9Y2T7 364 aaKnown RBP12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 IPPQ9Y573 584 aa12.86□□□□□ -0.35
DEPDC4-202ENST00000378244 PVALEFA0A1B0GWK0 134 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 A0A1W2PPC1 479 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 H0YCG3 227 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 STAG3L1P0CL83 205 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 DNAJB2P25686 324 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 AFF1P51825 1210 aaKnown RBP12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 LRIT3Q3SXY7 679 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 THNSL1Q8IYQ7 743 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 SMG8Q8ND04 991 aaKnown RBP12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 CERS4Q9HA82 394 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 TMEM161AQ9NX61 479 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 KLK14Q9P0G3 267 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 GDAQ9Y2T3 454 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 PCDHB13Q9Y5F0 798 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 PCDHA5Q9Y5H7 936 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 MICAL3Q7RTP6 2002 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 CLDN3O15551 220 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 DGKIO75912 1065 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 FAM189BP81408 668 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 CNNM4Q6P4Q7 775 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 NPAS4Q8IUM7 802 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 SMYD4Q8IYR2 804 aaPredicted RBP12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 ABI1Q8IZP0 508 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 CRIPAKQ8N1N5 446 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 HELQQ8TDG4 1101 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 TIGD1Q96MW7 591 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 FAM161BQ96MY7 647 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 RAD9AQ99638 391 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 HCSTQ9UBK5 93 aa12.85□□□□□ -0.35
DEPDC4-202ENST00000378244 TTC3P53804 2025 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 ANKRD63C9JTQ0 380 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 N4BP3O15049 544 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 TOM1L1O75674 476 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 ARHGEF15O94989 841 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 MYL1P05976 194 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 BTG3Q14201 252 aaPredicted RBP12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 MAP4K3Q8IVH8 894 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 NOC3LQ8WTT2 800 aaKnown RBP12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 ZFP42Q96MM3 310 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 CDT1Q9H211 546 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 NKX2-4Q9H2Z4 354 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 SNTG2Q9NY99 539 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 PARP2Q9UGN5 583 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 MSRAQ9UJ68 235 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 TNFSF13BQ9Y275 285 aa12.84□□□□□ -0.35
DEPDC4-202ENST00000378244 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms