RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 PIGOQ8TEQ8 1089 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 DEPDC1BQ8WUY9 529 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 RPS6KC1Q96S38 1066 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 REEP2Q9BRK0 252 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 CELF4Q9BZC1 486 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 MLXIPLQ9NP71 852 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 UBN1Q9NPG3 1134 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 AIPL1Q9NZN9 384 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 WHRNQ9P202 907 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 EMSYQ7Z589 1322 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 BTNL10A8MVZ5 291 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 TOM1O60784 492 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 KRT38O76015 456 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 ALAS1P13196 640 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 CCND2P30279 289 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SLC12A2P55011 1212 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SATB1Q01826 763 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 EXOC8Q8IYI6 725 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 C1orf54Q8WWF1 131 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 DRC3Q9H069 523 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 NRBP2Q9NSY0 501 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PPARGC1AQ9UBK2 798 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 DBR1Q9UK59 544 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 STRIP2Q9ULQ0 834 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 A6NJR5 290 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 NVLO15381 856 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SHOX2O60902 331 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SLC9A1P19634 815 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PMS1P54277 932 aaKnown RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 TMPRSS15P98073 1019 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PREPLQ4J6C6 727 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 C1orf146Q5VVC0 180 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 FAM160B1Q5W0V3 765 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 NXNQ6DKJ4 435 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 DNAJC9Q8WXX5 260 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 TTC17Q96AE7 1141 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 LRGUKQ96M69 825 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 C8orf37Q96NL8 207 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 EFHD1Q9BUP0 239 aa9.34□□□□□ -0.91
PCDH9-202ENST00000377865 PSMC3IPQ9P2W1 217 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 SEPT9Q9UHD8 586 aaPredicted RBP9.34□□□□□ -0.91
PCDH9-202ENST00000377865 TOM1L1O75674 476 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 MARK3P27448 753 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 PDE1BQ01064 536 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 DNAL1Q4LDG9 190 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 SCYL2Q6P3W7 929 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 DUSP9Q99956 384 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 GCOM2Q9BZD3 368 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 AS3MTQ9HBK9 375 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 SUGT1Q9Y2Z0 365 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 A0A087X0T9 212 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L15C9J2P7 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L13C9JLJ4 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L11C9JVI0 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L18D6R9N7 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L22D6RA61 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L17D6RBQ6 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L19D6RCP7 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L20D6RJB6 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 SMAPO00193 183 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 TRAPPC3O43617 180 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 FAM228BP0C875 321 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ESRRGP62508 458 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 DDR1Q08345 913 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L24Q0WX57 530 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 SLC29A2Q14542 456 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 DLGAP5Q15398 846 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 QRICH1Q2TAL8 776 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 USP17L6PQ6QN14 398 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 FBXO33Q7Z6M2 555 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 RCOR2Q8IZ40 523 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 NSMCE1Q8WV22 266 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ATXN2LQ8WWM7 1075 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 CELF1Q92879 486 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ZSWIM1Q9BR11 485 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ZHX2Q9Y6X8 837 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 RARGP13631 454 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 PON1P27169 355 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF543Q08ER8 600 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 COBLL1Q53SF7 1204 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 GFM2Q969S9 779 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 CDHR1Q96JP9 859 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 TLR10Q9BXR5 811 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 KLC2Q9H0B6 622 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 CYP26B1Q9NR63 512 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 MTO1Q9Y2Z2 717 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ARHGAP23Q9P227 1491 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 KIF1AQ12756 1690 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 PALM3A6NDB9 673 aaPredicted RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 E7ENQ6 273 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 ZNF844Q08AG5 666 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 PDIA2Q13087 525 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 EPHA7Q15375 998 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 GEN1Q17RS7 908 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 TSEN2Q8NCE0 465 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 GSDMBQ8TAX9 411 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 MDM1Q8TC05 714 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 WWP1Q9H0M0 922 aa9.33□□□□□ -0.92
PCDH9-202ENST00000377865 APOBEC2Q9Y235 224 aaKnown RBP9.33□□□□□ -0.92
PCDH9-202ENST00000377865 AFDNP55196 1824 aaKnown RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms