RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 EFNA5P52803 228 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 ERVFC1P60507 584 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 DRC1Q96MC2 740 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 NECAB3Q96P71 396 aaPredicted RBP18.58■□□□□ 0.56
HMGN4-201ENST00000377575 TIPINQ9BVW5 301 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 FZD8Q9H461 694 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 DAXXQ9UER7 740 aaPredicted RBP18.58■□□□□ 0.56
HMGN4-201ENST00000377575 PCDHGC5Q9Y5F6 944 aa18.58■□□□□ 0.56
HMGN4-201ENST00000377575 INPPL1O15357 1258 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 TBX10O75333 385 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 NPTXRO95502 500 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 SRGAP2BP0DMP2 458 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 LTBRP36941 435 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 DMP1Q13316 513 aaPredicted RBP18.57■□□□□ 0.56
HMGN4-201ENST00000377575 ADAM15Q13444 863 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 PRPF4BQ13523 1007 aaKnown RBP18.57■□□□□ 0.56
HMGN4-201ENST00000377575 SMC1AQ14683 1233 aaKnown RBP18.57■□□□□ 0.56
HMGN4-201ENST00000377575 TMC7Q7Z402 723 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 RBM23Q86U06 439 aaKnown RBP18.57■□□□□ 0.56
HMGN4-201ENST00000377575 ADPGKQ9BRR6 497 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 TMEM175Q9BSA9 504 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 APOL6Q9BWW8 343 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 CCDC113Q9H0I3 377 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 NXF3Q9H4D5 531 aaKnown RBP18.57■□□□□ 0.56
HMGN4-201ENST00000377575 STK39Q9UEW8 545 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 GIT1Q9Y2X7 761 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 HES2Q9Y543 173 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 BDP1A6H8Y1 2624 aa18.57■□□□□ 0.56
HMGN4-201ENST00000377575 PHLPP2Q6ZVD8 1323 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 GRXCR2A6NFK2 248 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 ARL5CA6NH57 179 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 NT5C1B-RDH14C9J2C7 533 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 LINC01565O15544 149 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 HIP1RO75146 1068 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 POMCP01189 267 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 GALTP07902 379 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 LIG1P18858 919 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 SYT1P21579 422 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 MLH1P40692 756 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 SF3A1Q15459 793 aaKnown RBP18.56■□□□□ 0.56
HMGN4-201ENST00000377575 DUSP6Q16828 381 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 RINT1Q6NUQ1 792 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 KCNK18Q7Z418 384 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 CABP7Q86V35 215 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 CALML4Q96GE6 196 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 IGSF21Q96ID5 467 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 KIFC3Q9BVG8 833 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 RUSC1Q9BVN2 902 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 DNAJB4Q9UDY4 337 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 CD207Q9UJ71 328 aa18.56■□□□□ 0.56
HMGN4-201ENST00000377575 ACKR2O00590 384 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 SSBP05455 408 aaKnown RBP eCLIP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 IL9P15248 144 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 LONP1P36776 959 aaKnown RBP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 UBA7P41226 1012 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 SLC11A1P49279 550 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 DLX2Q07687 328 aaPredicted RBP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 SMAD4Q13485 552 aaKnown RBP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 TMEM119Q4V9L6 283 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 APBB1IPQ7Z5R6 666 aaPredicted RBP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 DDX53Q86TM3 631 aaKnown RBP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 CDR2LQ86X02 465 aaPredicted RBP18.55■□□□□ 0.56
HMGN4-201ENST00000377575 ZNF280BQ86YH2 543 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 HSCBQ8IWL3 235 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 SNX21Q969T3 373 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 PNMA5Q96PV4 448 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 GAD1Q99259 594 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 PDZD7Q9H5P4 517 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 C17orf75Q9HAS0 396 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 KCND2Q9NZV8 630 aa18.55■□□□□ 0.56
HMGN4-201ENST00000377575 CCDC169A6NNP5 214 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 PER2O15055 1255 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 DDHD2O94830 711 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 GUCY2CP25092 1073 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 CA8P35219 290 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 SCNN1GP51170 649 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 PEX3P56589 373 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 RESTQ13127 1097 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 GIT2Q14161 759 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 CLUL1Q15846 466 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 DCAF4L1Q3SXM0 396 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 C1orf186Q6ZWK4 172 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 TMEM173Q86WV6 379 aaPredicted RBP18.54■□□□□ 0.56
HMGN4-201ENST00000377575 VPS52Q8N1B4 723 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 SYT2Q8N9I0 419 aaPredicted RBP18.54■□□□□ 0.56
HMGN4-201ENST00000377575 RASSF8Q8NHQ8 419 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 RPS6KC1Q96S38 1066 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 ZBP1Q9H171 429 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 POLD4Q9HCU8 107 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 FOXD4L1Q9NU39 408 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 PARP2Q9UGN5 583 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 FAN1Q9Y2M0 1017 aa18.54■□□□□ 0.56
HMGN4-201ENST00000377575 HIDE1A8MVS5 230 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 B4GALT3O60512 393 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 NR1I2O75469 434 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 GLP2RO95838 553 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 ALDH2P05091 517 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 AKAP5P24588 427 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 NPTX2P47972 431 aa18.53■□□□□ 0.56
HMGN4-201ENST00000377575 AFF1P51825 1210 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms