RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PADI3Q9ULW8 664 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 MICAL3Q7RTP6 2002 aa23.34■■□□□ 1.33
CBWD3-202ENST00000377342 LIG4P49917 911 aa23.33■■□□□ 1.33
CBWD3-202ENST00000377342 PAK2Q13177 524 aa23.33■■□□□ 1.33
CBWD3-202ENST00000377342 CT47A1Q5JQC4 288 aaPredicted RBP23.33■■□□□ 1.33
CBWD3-202ENST00000377342 ATF7IP2Q5U623 682 aa23.33■■□□□ 1.33
CBWD3-202ENST00000377342 CDR2LQ86X02 465 aaPredicted RBP23.33■■□□□ 1.33
CBWD3-202ENST00000377342 C7orf61Q8IZ16 206 aa23.33■■□□□ 1.33
CBWD3-202ENST00000377342 ZBTB45Q96K62 511 aaPredicted RBP23.33■■□□□ 1.33
CBWD3-202ENST00000377342 DUSP9Q99956 384 aaKnown RBP23.33■■□□□ 1.33
CBWD3-202ENST00000377342 STYXL1Q9Y6J8 313 aa23.33■■□□□ 1.33
CBWD3-202ENST00000377342 TIMP1P01033 207 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 LRRC63Q05C16 580 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 FOXR2Q6PJQ5 311 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 BPIFA3Q9BQP9 254 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 CBWD1Q9BRT8 395 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 HTATIP2Q9BUP3 242 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 TMX1Q9H3N1 280 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 ANKFY1Q9P2R3 1169 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 PIN4Q9Y237 131 aaKnown RBP23.32■■□□□ 1.32
CBWD3-202ENST00000377342 TNFSF13BQ9Y275 285 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 A0A1B0GUA9 196 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 TOM1L1O75674 476 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 LRRC55Q6ZSA7 311 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 HS2ST1Q7LGA3 356 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 C12orf56Q8IXR9 622 aa23.32■■□□□ 1.32
CBWD3-202ENST00000377342 ANK1P16157 1881 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 GPR182O15218 404 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 CLIC2O15247 247 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 CXCL10P02778 98 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 ZNF165P49910 485 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 NFX1Q12986 1120 aaKnown RBP23.31■■□□□ 1.32
CBWD3-202ENST00000377342 TCTN1Q2MV58 587 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 EDRF1Q3B7T1 1238 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 GAS2L3Q86XJ1 694 aa23.31■■□□□ 1.32
CBWD3-202ENST00000377342 ZC3H3Q8IXZ2 948 aaKnown RBP23.31■■□□□ 1.32
CBWD3-202ENST00000377342 IFIH1Q9BYX4 1025 aaKnown RBP23.31■■□□□ 1.32
CBWD3-202ENST00000377342 BICDL2A1A5D9 508 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 MGEA5O60502 916 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 SNRPFP62306 86 aaKnown RBP23.3■■□□□ 1.32
CBWD3-202ENST00000377342 NCAPHQ15003 741 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 NFIL3Q16649 462 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 PLEKHG4Q58EX7 1191 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 MPZL3Q6UWV2 235 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 DHX40Q8IX18 779 aaKnown RBP23.3■■□□□ 1.32
CBWD3-202ENST00000377342 ZSWIM2Q8NEG5 633 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 GOLGA5Q8TBA6 731 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 ANP32EQ9BTT0 268 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 CDT1Q9H211 546 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 CBX8Q9HC52 389 aa23.3■■□□□ 1.32
CBWD3-202ENST00000377342 A0A0B4J269 797 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 FAM189A1O60320 539 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 NR3C1P04150 777 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 RAG1P15918 1043 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 AXLP30530 894 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 DSC3Q14574 896 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 IQCB1Q15051 598 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 RALGAPA2Q2PPJ7 1873 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 ZNF568Q3ZCX4 644 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 UBXN11Q5T124 520 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 ARMCX5Q6P1M9 558 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 NOTUMQ6P988 496 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 AOPEPQ8N6M6 819 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 ENOX1Q8TC92 643 aaKnown RBP23.29■■□□□ 1.32
CBWD3-202ENST00000377342 TMEM174Q8WUU8 243 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 TSG101Q99816 390 aa23.29■■□□□ 1.32
CBWD3-202ENST00000377342 NAT10Q9H0A0 1025 aaKnown RBP23.29■■□□□ 1.32
CBWD3-202ENST00000377342 CGNQ9P2M7 1197 aaKnown RBP23.29■■□□□ 1.32
CBWD3-202ENST00000377342 N4BP3O15049 544 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 CALUO43852 315 aaPredicted RBP23.28■■□□□ 1.32
CBWD3-202ENST00000377342 PARNO95453 639 aaKnown RBP23.28■■□□□ 1.32
CBWD3-202ENST00000377342 GARTP22102 1010 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 MCL1Q07820 350 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 TMEM132AQ24JP5 1023 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 FAM200AQ8TCP9 573 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 LINC01599Q8WXQ3 324 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 EEF2KMTQ96G04 330 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 DMAC2Q9NW81 257 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 CITO14578 2027 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 CAVIN2O95810 425 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 NR2F2P24468 414 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 MYL5Q02045 173 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 NOLC1Q14978 699 aaKnown RBP eCLIP23.28■■□□□ 1.32
CBWD3-202ENST00000377342 MFSD5Q6N075 450 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 ZBTB33Q86T24 672 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 SLC9A9Q8IVB4 645 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 POMGNT1Q8WZA1 660 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 EIF2AQ9BY44 585 aaKnown RBP23.28■■□□□ 1.32
CBWD3-202ENST00000377342 PCIF1Q9H4Z3 704 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 HSPBP1Q9NZL4 362 aa23.28■■□□□ 1.32
CBWD3-202ENST00000377342 CLDN3O15551 220 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 EVI5O60447 810 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 RFC2P35250 354 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 CYP2J2P51589 502 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 ZBTB41Q5SVQ8 909 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 SLFN12LQ6IEE8 588 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 SLC27A1Q6PCB7 646 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 DEFB128Q7Z7B8 93 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 CSGALNACT2Q8N6G5 542 aa23.27■■□□□ 1.32
CBWD3-202ENST00000377342 CEP120Q8N960 986 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms