RNA–Protein interactions for RNA: ENST00000377194.7

TRIM27-201, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best) BASIC

Gene TRIM27, Length 2,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-201ENST00000377194 CACNA2D3Q8IZS8 1091 aa18.5■□□□□ 0.55
TRIM27-201ENST00000377194 TPCN2Q8NHX9 752 aa18.5■□□□□ 0.55
TRIM27-201ENST00000377194 NEK9Q8TD19 979 aa18.5■□□□□ 0.55
TRIM27-201ENST00000377194 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
TRIM27-201ENST00000377194 GPRC5CQ9NQ84 441 aa18.5■□□□□ 0.55
TRIM27-201ENST00000377194 MYCLP12524 364 aaPredicted RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 FERP16591 822 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 QARSP47897 775 aaKnown RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 PGM5Q15124 567 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 RPS6KA1Q15418 735 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 NIPA1Q7RTP0 329 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 DDX42Q86XP3 938 aaKnown RBP eCLIP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 SLC9A9Q8IVB4 645 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 ARFGAP2Q8N6H7 521 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 LMO3Q8TAP4 145 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 CBWD1Q9BRT8 395 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 INTS2Q9H0H0 1204 aaKnown RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 PIM2Q9P1W9 311 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 BUB1BO60566 1050 aaPredicted RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 KIF4AO95239 1232 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 ATP6V1G2O95670 118 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 H2AFZP0C0S5 128 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 ZBTB48P10074 688 aaPredicted RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 ERVK-9P63128 1117 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 PPP1R7Q15435 360 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 H2AFVQ71UI9 128 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 JDP2Q8WYK2 163 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 RAPGEF5Q92565 580 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 TAF1DQ9H5J8 278 aaPredicted RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 LARSQ9P2J5 1176 aaKnown RBP18.49■□□□□ 0.55
TRIM27-201ENST00000377194 SLC12A6Q9UHW9 1150 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 RIPK3Q9Y572 518 aa18.49■□□□□ 0.55
TRIM27-201ENST00000377194 SRRM3A6NNA2 597 aaPredicted RBP18.48■□□□□ 0.55
TRIM27-201ENST00000377194 YWHABP31946 246 aaKnown RBP18.48■□□□□ 0.55
TRIM27-201ENST00000377194 SLC8A1P32418 973 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 GALCP54803 685 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 ELF3P78545 371 aaPredicted RBP18.48■□□□□ 0.55
TRIM27-201ENST00000377194 UAP1Q16222 522 aaPredicted RBP18.48■□□□□ 0.55
TRIM27-201ENST00000377194 NSMCE1Q8WV22 266 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 SYT11Q9BT88 431 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 KIF9Q9HAQ2 790 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 APEX2Q9UBZ4 518 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 PPP1R9AQ9ULJ8 1098 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 L3MBTL1Q9Y468 752 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 H0YGN5 161 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 CCNE2O96020 404 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 ECHS1P30084 290 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 ARHGAP44Q17R89 818 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 VPS36Q86VN1 386 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 PALB2Q86YC2 1186 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 USP38Q8NB14 1042 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 TCP11Q8WWU5 503 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 TAOK3Q9H2K8 898 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 DBR1Q9UK59 544 aaKnown RBP18.48■□□□□ 0.55
TRIM27-201ENST00000377194 FZD1Q9UP38 647 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 NFS1Q9Y697 457 aa18.48■□□□□ 0.55
TRIM27-201ENST00000377194 MYL7Q01449 175 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 PPP3CAQ08209 521 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 TNIP1Q15025 636 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 CPLX4Q7Z7G2 160 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 SPDL1Q96EA4 605 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 RMDN3Q96TC7 470 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 ISCUQ9H1K1 167 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 RPAP3Q9H6T3 665 aaPredicted RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 LRRC4CQ9HCJ2 640 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 OSGEPQ9NPF4 335 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 FOXN3O00409 490 aaPredicted RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 CTNND1O60716 968 aaKnown RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 PLS3P13797 630 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 ANXA13P27216 316 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 CTNNA1P35221 906 aaKnown RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 NPEPPSP55786 919 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 INHBEP58166 350 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 ZNF280AP59817 542 aaPredicted RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 TNNC1P63316 161 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 SARNPP82979 210 aaKnown RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 ZNF844Q08AG5 666 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 XRCC4Q13426 336 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 NBPF12Q5TAG4 269 aaPredicted RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 LRIG3Q6UXM1 1119 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 RSRC1Q96IZ7 334 aaKnown RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 PDCD2LQ9BRP1 358 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 TMEM59LQ9UK28 342 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 NOVA2Q9UNW9 492 aaKnown RBP18.47■□□□□ 0.55
TRIM27-201ENST00000377194 EMSYQ7Z589 1322 aa18.47■□□□□ 0.55
TRIM27-201ENST00000377194 NFKBIEO00221 500 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 MGRN1O60291 552 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 CLTAP09496 248 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 C1orf220Q5T0J3 134 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 PLA2G4FQ68DD2 849 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 NSMFQ6X4W1 530 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 PNMA8AQ86V59 439 aaPredicted RBP18.46■□□□□ 0.55
TRIM27-201ENST00000377194 METTL13Q8N6R0 699 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 MDM1Q8TC05 714 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 PLEKHO2Q8TD55 490 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 MAGEC3Q8TD91 643 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 TAS2R14Q9NYV8 317 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 HAUS6Q7Z4H7 955 aa18.46■□□□□ 0.55
TRIM27-201ENST00000377194 SLFN11Q7Z7L1 901 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms