RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 STRIP1Q5VSL9 837 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CYB5D1Q6P9G0 228 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 PADI6Q6TGC4 694 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 EPS8L1Q8TE68 723 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CSRNP1Q96S65 589 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 NCAPGQ9BPX3 1015 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 SH2D3AQ9BRG2 576 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 MRIQ9BWK5 157 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 WDR11Q9BZH6 1224 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 SLX4Q8IY92 1834 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 PFASO15067 1338 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 IPO5O00410 1097 aaKnown RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 ECE2O60344 883 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 TOM1O60784 492 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 VIL1P09327 827 aaKnown RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 ALAS1P13196 640 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 INTS8Q75QN2 995 aaKnown RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC91Q7Z6B0 441 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 LRRC34Q8IZ02 419 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CD101Q93033 1021 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 TRPC6Q9Y210 931 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 RTN2O75298 545 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 HSPA6P17066 643 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 SIX1Q15475 284 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CLUL1Q15846 466 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC38Q502W7 563 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 SEL1L2Q5TEA6 688 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 SEPT12Q8IYM1 358 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 POP1Q99575 1024 aaKnown RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 TEKT3Q9BXF9 490 aa14.23□□□□□ -0.13
ACTN1-202ENST00000376839 ZNF219Q9P2Y4 722 aaPredicted RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 NOCTQ9UK39 431 aaKnown RBP14.23□□□□□ -0.13
ACTN1-202ENST00000376839 CHUKO15111 745 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 CYP26A1O43174 497 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 RIPK2O43353 540 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 NPM3O75607 178 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 RARAP10276 462 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 MUTP22033 750 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 ALDH1B1P30837 517 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 IRX3P78415 501 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 TCEAL1Q15170 157 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 SLC47A2Q86VL8 602 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 FAM228AQ86W67 206 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC197Q8NCU1 140 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 KREMEN1Q96MU8 473 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 RPS6KC1Q96S38 1066 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 PRMT1Q99873 361 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 COL11A2P13942 1736 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 ATRNL1Q5VV63 1379 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 PODXLO00592 558 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 TRIM37O94972 964 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 COILP38432 576 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 IFNAR2P48551 515 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 ZYXQ15942 572 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 SLC13A5Q86YT5 568 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 PARP9Q8IXQ6 854 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC105Q8IYK2 499 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 ZNF622Q969S3 477 aaKnown RBP eCLIP14.22□□□□□ -0.139e-7■□□□□ 10.1
ACTN1-202ENST00000376839 ELMO3Q96BJ8 720 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 PRMT6Q96LA8 375 aaPredicted RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 A1CFQ9NQ94 594 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 INTS9Q9NV88 658 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 HSPBP1Q9NZL4 362 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 MTRF1LQ9UGC7 380 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 SERPINA10Q9UK55 444 aa14.22□□□□□ -0.13
ACTN1-202ENST00000376839 DBR1Q9UK59 544 aaKnown RBP14.22□□□□□ -0.13
ACTN1-202ENST00000376839 GOLGA8IPA6NC78 632 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 GOLGA8JA6NMD2 632 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 AGTP01019 485 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 ITGB5P18084 799 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 GSCP56915 257 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-202ENST00000376839 ADCY2Q08462 1091 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 CETN1Q12798 172 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 MYBPC2Q14324 1141 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 C6orf118Q5T5N4 469 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 NSMFQ6X4W1 530 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 CCDC25Q86WR0 208 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 COL23A1Q86Y22 540 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-202ENST00000376839 ZNF564Q8TBZ8 553 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-202ENST00000376839 SGSM3Q96HU1 749 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 NUP85Q9BW27 656 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 TMEM117Q9H0C3 514 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 TMX4Q9H1E5 349 aaPredicted RBP14.21□□□□□ -0.13
ACTN1-202ENST00000376839 KDM4CQ9H3R0 1056 aa14.21□□□□□ -0.13
ACTN1-202ENST00000376839 CNOT7Q9UIV1 285 aaKnown RBP14.21□□□□□ -0.13
ACTN1-202ENST00000376839 TMEM150BA6NC51 233 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 CCT8L1PA6NM43 557 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 SPOPO43791 374 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 MXI1P50539 228 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 FMO1Q01740 532 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 AUHQ13825 339 aaKnown RBP14.21□□□□□ -0.14
ACTN1-202ENST00000376839 CYP1B1Q16678 543 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 GRIPAP1Q4V328 841 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 FAM71AQ8IYT1 594 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 PPM1KQ8N3J5 372 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 CCDC113Q9H0I3 377 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 WNT8AQ9H1J5 351 aa14.21□□□□□ -0.14
ACTN1-202ENST00000376839 RANBP17Q9H2T7 1088 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms