RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 EEF2KMTQ96G04 330 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 NDFIP2Q9NV92 336 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 THOC2Q8NI27 1593 aaKnown RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 KAT6AQ92794 2004 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 SEMA3EO15041 775 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 BRAFP15056 766 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 KCNQ4P56696 695 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 NEK10Q6ZWH5 1172 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 FAM45AQ8TCE6 357 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 NDST4Q9H3R1 872 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 TRIM24O15164 1050 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 PALMO75781 387 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ACTN3Q08043 901 aaPredicted RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 EIF2B5Q13144 721 aaKnown RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ALKBH5Q6P6C2 394 aaKnown RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 IFNL3Q8IZI9 196 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 WNT8AQ9H1J5 351 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 EPN3Q9H201 632 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 KIAA1586Q9HCI6 787 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 STAP1Q9ULZ2 295 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 SETD3Q86TU7 594 aaPredicted RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 NGRNQ9NPE2 291 aaKnown RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 CEP72Q9P209 647 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ARIH1Q9Y4X5 557 aaPredicted RBP12.29□□□□□ -0.44
VPS13A-205ENST00000376636 CLIC4Q9Y696 253 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 KRT76Q01546 638 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 LRRC74AQ0VAA2 488 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ADRM1Q16186 407 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ATAD3BQ5T9A4 648 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 DYRK4Q9NR20 520 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 CTSWP56202 376 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ABCB5Q2M3G0 1257 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 NUDT18Q6ZVK8 323 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 ZSWIM6Q9HCJ5 1215 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 INSRP06213 1382 aa12.29□□□□□ -0.44
VPS13A-205ENST00000376636 LRRC53A6NM62 1247 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 KRT78Q8N1N4 520 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 MAML3Q96JK9 1138 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SYNCRIPO60506 623 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 TSPY1Q01534 308 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SPRTNQ9H040 489 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 MYLK2Q9H1R3 596 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ARHGAP31Q2M1Z3 1444 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 DNALI1O14645 258 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 KDSRQ06136 332 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ZBED8Q8IZ13 594 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 TMA16Q96EY4 203 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 EXOSC4Q9NPD3 245 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 NRBP1Q9UHY1 535 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 PYCARDQ9ULZ3 195 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ITGAXP20702 1163 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ALDH18A1P54886 795 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SF3B3Q15393 1217 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 DPCR1Q3MIW9 517 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 CC2D2BQ6DHV5 1058 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 KLHL24Q6TFL4 600 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 RHPN2Q8IUC4 686 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ANO9A1A5B4 782 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 TLR2O60603 784 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 BFARQ9NZS9 450 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SORBS3O60504 671 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ALBP02768 609 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 RAD51Q06609 339 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 TTC33Q6PID6 262 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 MXD3Q9BW11 206 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 MEFVO15553 781 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 KLHL2O95198 593 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ADAM22Q9P0K1 906 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 CCNL1Q9UK58 526 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 CDYLQ9Y232 598 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 CDKL3Q8IVW4 592 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 GIMAP8Q8ND71 665 aaPredicted RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 DCUN1D1Q96GG9 259 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 CLASP2O75122 1294 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 ENO1P06733 434 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SERPINH1P50454 418 aaKnown RBP12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SGSM1Q2NKQ1 1148 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 SH3BP5LQ7L8J4 393 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 PRRG3Q9BZD7 231 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 DTNAQ9Y4J8 743 aa12.28□□□□□ -0.44
VPS13A-205ENST00000376636 BTBD18B2RXH4 712 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 USP17L12C9JPN9 530 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 USP17L21D6R901 530 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 MLNP12872 115 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 MMRN1Q13201 1228 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 C6orf10Q5SRN2 563 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 MSTO1Q9BUK6 570 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 SMIM31A0A1B0GVY4 71 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 FKBP9O95302 570 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 ZAP70P43403 619 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 GPC5P78333 572 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 TMEM154Q6P9G4 183 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 SYDE1Q6ZW31 735 aaPredicted RBP12.27□□□□□ -0.44
VPS13A-205ENST00000376636 FKBP9P1Q75LS8 142 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 GPR141Q7Z602 305 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 SRLQ86TD4 932 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 MB21D1Q8N884 522 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 CLIC6Q96NY7 704 aa12.27□□□□□ -0.44
VPS13A-205ENST00000376636 TOPORSQ9NS56 1045 aaPredicted RBP12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms