RNA–Protein interactions for RNA: ENST00000375429.7

NELFE-202, Transcript of negative elongation factor complex member E, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NELFE, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-202ENST00000375429 ERCC5P28715 1186 aaPredicted RBP22.6■■□□□ 1.21
NELFE-202ENST00000375429 ZCWPW2Q504Y3 356 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 CT47A1Q5JQC4 288 aaPredicted RBP22.6■■□□□ 1.21
NELFE-202ENST00000375429 EEF1DP3Q658K8 133 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 DPF3Q92784 378 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 HAPLN2Q9GZV7 340 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 PTPRHQ9HD43 1115 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 AGPAT3Q9NRZ7 376 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 RWDD2AQ9UIY3 292 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 TNFSF13BQ9Y275 285 aa22.6■■□□□ 1.21
NELFE-202ENST00000375429 ABLIM1O14639 778 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 CLIC2O15247 247 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 ADSSP30520 456 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 AXLP30530 894 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 NCBP1Q09161 790 aaKnown RBP22.59■■□□□ 1.21
NELFE-202ENST00000375429 TMEM132AQ24JP5 1023 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 TTI2Q6NXR4 508 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 VWCEQ96DN2 955 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 ANP32EQ9BTT0 268 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 IFIH1Q9BYX4 1025 aaKnown RBP22.59■■□□□ 1.21
NELFE-202ENST00000375429 TMX1Q9H3N1 280 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 PDZD7Q9H5P4 517 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 PRKAG2Q9UGJ0 569 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 PIN4Q9Y237 131 aaKnown RBP22.59■■□□□ 1.21
NELFE-202ENST00000375429 STYXL1Q9Y6J8 313 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 TOM1L1O75674 476 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 CXCL10P02778 98 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 PROZP22891 400 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 PLEKHG4Q58EX7 1191 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 MFSD5Q6N075 450 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 HS2ST1Q7LGA3 356 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 DEFB128Q7Z7B8 93 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 DBF4BQ8NFT6 615 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 DUSP9Q99956 384 aaKnown RBP22.59■■□□□ 1.21
NELFE-202ENST00000375429 TSPY26PQ9H489 355 aa22.59■■□□□ 1.21
NELFE-202ENST00000375429 CALUO43852 315 aaPredicted RBP22.58■■□□□ 1.2
NELFE-202ENST00000375429 SNRPFP62306 86 aaKnown RBP22.58■■□□□ 1.2
NELFE-202ENST00000375429 NOTUMQ6P988 496 aa22.58■■□□□ 1.2
NELFE-202ENST00000375429 CBWD1Q9BRT8 395 aa22.58■■□□□ 1.2
NELFE-202ENST00000375429 TCHPQ9BT92 498 aa22.58■■□□□ 1.2
NELFE-202ENST00000375429 ANKFY1Q9P2R3 1169 aa22.58■■□□□ 1.2
NELFE-202ENST00000375429 BICDL2A1A5D9 508 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 CLDN3O15551 220 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 MGEA5O60502 916 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 CSF2RAP15509 400 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 SYN1P17600 705 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 ZNF165P49910 485 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 LRRC63Q05C16 580 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 DSC3Q14574 896 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 TCTN1Q2MV58 587 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 SLFN12LQ6IEE8 588 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 ARMCX5Q6P1M9 558 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 MPZL3Q6UWV2 235 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 ZBTB33Q86T24 672 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 GOLGA5Q8TBA6 731 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 POMGNT1Q8WZA1 660 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 TSG101Q99816 390 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 NAT10Q9H0A0 1025 aaKnown RBP22.57■■□□□ 1.2
NELFE-202ENST00000375429 PCIF1Q9H4Z3 704 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 CHST12Q9NRB3 414 aa22.57■■□□□ 1.2
NELFE-202ENST00000375429 CGNQ9P2M7 1197 aaKnown RBP22.57■■□□□ 1.2
NELFE-202ENST00000375429 A0A0B4J269 797 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 N4BP3O15049 544 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 GARTP22102 1010 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 RFC2P35250 354 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 EDRF1Q3B7T1 1238 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 UBXN11Q5T124 520 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 FOXR2Q6PJQ5 311 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 C12orf56Q8IXR9 622 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 TMEM199Q8N511 208 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 SEPT8Q92599 483 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 DMAC2Q9NW81 257 aa22.56■■□□□ 1.2
NELFE-202ENST00000375429 NR3C1P04150 777 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 MATR3P43243 847 aaKnown RBP eCLIP22.55■■□□□ 1.2
NELFE-202ENST00000375429 MCL1Q07820 350 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 NFIL3Q16649 462 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 ZNF568Q3ZCX4 644 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 SLC27A1Q6PCB7 646 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 RTN4RL1Q86UN2 441 aaPredicted RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 ZSWIM2Q8NEG5 633 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 ENOX1Q8TC92 643 aaKnown RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 BADQ92934 168 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 EEF2KMTQ96G04 330 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 BPIFA3Q9BQP9 254 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 EIF2AQ9BY44 585 aaKnown RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 CDT1Q9H211 546 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 ZMYND8Q9ULU4 1186 aaPredicted RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 HARSP12081 509 aaKnown RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 ZSCAN20P17040 1043 aaPredicted RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 CYP2J2P51589 502 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 TWF2Q6IBS0 349 aaKnown RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 TMEM174Q8WUU8 243 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 ADAM2Q99965 735 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 CBX8Q9HC52 389 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 HSPBP1Q9NZL4 362 aa22.55■■□□□ 1.2
NELFE-202ENST00000375429 AGO2Q9UKV8 859 aaKnown RBP22.55■■□□□ 1.2
NELFE-202ENST00000375429 LTBP2Q14767 1821 aa22.54■■□□□ 1.2
NELFE-202ENST00000375429 NPTXRO95502 500 aa22.54■■□□□ 1.2
NELFE-202ENST00000375429 NR2F2P24468 414 aa22.54■■□□□ 1.2
NELFE-202ENST00000375429 FKBP3Q00688 224 aaKnown RBP22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms