RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 PCDHGA1Q9Y5H4 931 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SAR1BQ9Y6B6 198 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 POLEQ07864 2286 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 KMOO15229 486 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 FAM153BP0C7A2 387 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TNFAIP3P21580 790 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RFC4P35249 363 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 MTA1Q13330 715 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TTMPQ5BVD1 217 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ERMARDQ5T6L9 678 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 FAM47EQ6ZV65 393 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 IQCF2Q8IXL9 164 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 DGCR14Q96DF8 476 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ACAP3Q96P50 834 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CHID1Q9BWS9 393 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 DSN1Q9H410 356 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 EFCAB1Q9HAE3 211 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 BTBD7Q9P203 1132 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 GNG13Q9P2W3 67 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM49BA6NDI0 452 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TRIM49D1C9J1S8 452 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ITGB3P05106 788 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CD53P19397 219 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CA4P22748 312 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SLC9A3P48764 834 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ETF1P62495 437 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 MRPS22P82650 360 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 FOXD4Q12950 439 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 KRT33BQ14525 404 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 FAAH2Q6GMR7 532 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC81Q6ZN84 652 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 KIRREL3Q8IZU9 778 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CAMKK1Q8N5S9 505 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 WDR48Q8TAF3 677 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 SSH1Q8WYL5 1049 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 IMPAD1Q9NX62 359 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC189A1A4V9 331 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 GDI2P50395 445 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 PKN2Q16513 984 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF284Q2VY69 593 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NEK8Q86SG6 692 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RFX6Q8HWS3 928 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CLEC4FQ8N1N0 589 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RPLP0P6Q8NHW5 317 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF671Q8TAW3 534 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 BTBD6Q96KE9 485 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CHCHD6Q9BRQ6 235 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 ATXN3LQ9H3M9 355 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 JMJD4Q9H9V9 463 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 IL1RL2Q9HB29 575 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 BRD4O60885 1362 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NPIPA5A0A0B4J1W7 369 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TYW5A2RUC4 315 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CLCA1A8K7I4 914 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NTRK1P04629 796 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NFKBIAP25963 317 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 RAD23BP54727 409 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 CDC26Q8NHZ8 85 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 PIGKQ92643 395 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 DHTKD1Q96HY7 919 aaPredicted RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 TBATAQ96M53 351 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 XPO4Q9C0E2 1151 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 NOL6Q9H6R4 1146 aaKnown RBP6.29□□□□□ -1.4
SCN2A-202ENST00000375427 POLIQ9UNA4 740 aa6.29□□□□□ -1.4
SCN2A-202ENST00000375427 EVPLLA8MZ36 301 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 KRT36O76013 467 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 TAC1P20366 129 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 SCGB2A2Q13296 93 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 FERMT3Q86UX7 667 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 FAM212AQ96EL1 285 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 NUDT16L1Q9BRJ7 211 aaKnown RBP6.28□□□□□ -1.4
SCN2A-202ENST00000375427 PHF11Q9UIL8 331 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 ZNF197O14709 1029 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 JAK1P23458 1154 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 SOX11P35716 441 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 ASIC1P78348 528 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 POU5F1Q01860 360 aaKnown RBP6.28□□□□□ -1.4
SCN2A-202ENST00000375427 SRSF11Q05519 484 aaKnown RBP6.28□□□□□ -1.4
SCN2A-202ENST00000375427 RALGDSQ12967 914 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 CHRNA2Q15822 529 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 MZT2BQ6NZ67 158 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 CDC73Q6P1J9 531 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 PEX5LQ8IYB4 626 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 IGSF22Q8N9C0 903 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 GRPEL2Q8TAA5 225 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 PCDH19Q8TAB3 1148 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 LIN37Q96GY3 246 aaPredicted RBP6.28□□□□□ -1.4
SCN2A-202ENST00000375427 FNBP1Q96RU3 617 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 CCDC87Q9NVE4 849 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 VPS4AQ9UN37 437 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 FKBP9O95302 570 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 ATF2P15336 505 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 CASRP41180 1078 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 RAB25P57735 213 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 FKBP9P1Q75LS8 142 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 AOPEPQ8N6M6 819 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 NGDNQ8NEJ9 315 aaKnown RBP6.28□□□□□ -1.4
SCN2A-202ENST00000375427 BEST2Q8NFU1 509 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 USP26Q9BXU7 913 aa6.28□□□□□ -1.4
SCN2A-202ENST00000375427 VPS11Q9H270 941 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms