RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 MAP3K14Q99558 947 aa2.63□□□□□ -1.99
CCDC7-204ENST00000375025 SMAD5Q99717 465 aaKnown RBP2.63□□□□□ -1.99
CCDC7-204ENST00000375025 ANP32EQ9BTT0 268 aa2.63□□□□□ -1.99
CCDC7-204ENST00000375025 MRPL9Q9BYD2 267 aaKnown RBP2.63□□□□□ -1.99
CCDC7-204ENST00000375025 SLC13A1Q9BZW2 595 aa2.63□□□□□ -1.99
CCDC7-204ENST00000375025 ZC3H12CQ9C0D7 883 aaKnown RBP2.63□□□□□ -1.99
CCDC7-204ENST00000375025 ATP6V0A4Q9HBG4 840 aa2.63□□□□□ -1.99
CCDC7-204ENST00000375025 ZNF277Q9NRM2 450 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-204ENST00000375025 PDP2Q9P2J9 529 aa2.63□□□□□ -1.99
CCDC7-204ENST00000375025 RPAP1Q9BWH6 1393 aaPredicted RBP2.63□□□□□ -1.99
CCDC7-204ENST00000375025 hCG_1642624A0A1W2PR95 340 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TRIM64CA6NLI5 447 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 H7C1D1 291 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 hCG_1984214I3L0E3 225 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 APAF1O14727 1248 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PLOD3O60568 738 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GJB6O95452 261 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 POU3F2P20265 443 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GARTP22102 1010 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 HOXD10P28358 340 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CTNNA1P35221 906 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GMPSP49915 693 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 LMNB2Q03252 620 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GAB4Q2WGN9 574 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SLC10A5Q5PT55 438 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SFRP5Q5T4F7 317 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 FAAH2Q6GMR7 532 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 MPRIPQ6WCQ1 1025 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 COLGALT2Q8IYK4 626 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 USP38Q8NB14 1042 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 APPL2Q8NEU8 664 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PIWIL2Q8TC59 973 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZNF507Q8TCN5 953 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 EPS8L3Q8TE67 593 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 MYLIPQ8WY64 445 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 DDX1Q92499 740 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 JARID2Q92833 1246 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TBC1D20Q96BZ9 403 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 DCPSQ96C86 337 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 VMP1Q96GC9 406 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 BORCS6Q96GS4 357 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CRAMP1Q96RY5 1269 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 NUP88Q99567 741 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 C1orf112Q9NSG2 853 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SRP68Q9UHB9 627 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TACC3Q9Y6A5 838 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GAKO14976 1311 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 FRMPD2Q68DX3 1309 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ANKRD18BA2A2Z9 1011 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 F5H423 210 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 FOXD2O60548 495 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 DDX58O95786 925 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CCDC159P0C7I6 412 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CCL5P13501 91 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CASQ1P31415 396 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 UBA7P41226 1012 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 RAD52P43351 418 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ID4P47928 161 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZNF165P49910 485 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZNF132P52740 706 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 KRT85P78386 507 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ST5P78524 1137 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZBED6P86452 979 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CXCL9Q07325 125 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 KIAA2012Q0VF49 1180 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PSMD6Q15008 389 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PPM1JQ5JR12 505 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 SNAP47Q5SQN1 464 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ARMC3Q5W041 872 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 OTOP3Q7RTS5 596 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CCDC84Q86UT8 332 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ANKRD18AQ8IVF6 992 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 LILRA2Q8N149 483 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 MFSD2AQ8NA29 543 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ZBTB38Q8NAP3 1195 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 U2AF1L4Q8WU68 220 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 HERVK_113Q902F9 699 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CLIP3Q96DZ5 547 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CCDC34Q96HJ3 373 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 DIRC2Q96SL1 478 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TARS2Q9BW92 718 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 XPO4Q9C0E2 1151 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 OSBPL5Q9H0X9 879 aaPredicted RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 NCOA5Q9HCD5 579 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 ALG13Q9NP73 1137 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 CPSF2Q9P2I0 782 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PFDN2Q9UHV9 154 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 XPO7Q9UIA9 1087 aaKnown RBP2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TRHDEQ9UKU6 1024 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 DMTF1Q9Y222 760 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TMEM98Q9Y2Y6 226 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 BAHCC1Q9P281 2608 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 COL4A1P02462 1669 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 TEX51A0A1B0GUA7 166 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 A6NCN8 305 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 MINDY4BA8MYZ0 360 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 GOLGA6L22H0YM25 854 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 K7ESF4 209 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 HRKO00198 91 aa2.62□□□□□ -1.99
CCDC7-204ENST00000375025 PRPF3O43395 683 aaKnown RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms