RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DR1Q01658 176 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 SNX1Q13596 522 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 CCDC25Q86WR0 208 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 MICALL1Q8N3F8 863 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 MAGOHBQ96A72 148 aaKnown RBP18.39■□□□□ 0.54
RXRB-201ENST00000374680 PDCD2LQ9BRP1 358 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 KMT5AQ9NQR1 393 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 UBIAD1Q9Y5Z9 338 aa18.39■□□□□ 0.54
RXRB-201ENST00000374680 E7EVH7 732 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 SEZ6Q53EL9 994 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 JDP2Q8WYK2 163 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 FAM118BQ9BPY3 351 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 FAM213AQ9BRX8 229 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 SYT11Q9BT88 431 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 STRA6Q9BX79 667 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 DNAJC17Q9NVM6 304 aaKnown RBP18.39■□□□□ 0.53
RXRB-201ENST00000374680 RPS6KA5O75582 802 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 CIAPIN1Q6FI81 312 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 ZDHHC14Q8IZN3 488 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 MDM1Q8TC05 714 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 SLC38A10Q9HBR0 1119 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 RNF146Q9NTX7 359 aa18.39■□□□□ 0.53
RXRB-201ENST00000374680 HNRNPDLO14979 420 aaKnown RBP18.38■□□□□ 0.53
RXRB-201ENST00000374680 SHOX2O60902 331 aaPredicted RBP18.38■□□□□ 0.53
RXRB-201ENST00000374680 CHRNB2P17787 502 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 LSP1P33241 339 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 GJC1P36383 396 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 HSPA9P38646 679 aaKnown RBP18.38■□□□□ 0.53
RXRB-201ENST00000374680 SLCO1A2P46721 670 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 HMGCS2P54868 508 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 ZNF844Q08AG5 666 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 NLRX1Q86UT6 975 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 MCF2L2Q86YR7 1114 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 DAAM1Q9Y4D1 1078 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 FAM169AQ9Y6X4 670 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 A0A0A6YYK5 440 aaPredicted RBP18.38■□□□□ 0.53
RXRB-201ENST00000374680 MYO1FO00160 1098 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 PYGMP11217 842 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 GPC5P78333 572 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 ZNF653Q96CK0 615 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 NUP85Q9BW27 656 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 SEPT9Q9UHD8 586 aaPredicted RBP18.38■□□□□ 0.53
RXRB-201ENST00000374680 TBX20Q9UMR3 447 aa18.38■□□□□ 0.53
RXRB-201ENST00000374680 ZNF862O60290 1169 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 SHBGP04278 402 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 TRIP13Q15645 432 aaPredicted RBP18.37■□□□□ 0.53
RXRB-201ENST00000374680 MTERF2Q49AM1 385 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 PCNX4Q63HM2 1172 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 SNRNP48Q6IEG0 339 aaKnown RBP18.37■□□□□ 0.53
RXRB-201ENST00000374680 SPOPLQ6IQ16 392 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 FBXO25Q8TCJ0 367 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 EPS8L1Q8TE68 723 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 KCND2Q9NZV8 630 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 CCDC188H7C350 402 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 ZBED4O75132 1171 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 ACOT2P49753 483 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 VPS41P49754 854 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 MAGOHP61326 146 aaKnown RBP18.37■□□□□ 0.53
RXRB-201ENST00000374680 PSMC5P62195 406 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 CUL1Q13616 776 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 KIF22Q14807 665 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 RASGEF1CQ8N431 466 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 RUBCNQ92622 972 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 PXMP2Q9NR77 195 aa18.37■□□□□ 0.53
RXRB-201ENST00000374680 NF2P35240 595 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 SMTNP53814 917 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 DMP1Q13316 513 aaPredicted RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 ZNF772Q68DY9 489 aaPredicted RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 PASD1Q8IV76 773 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 CPA5Q8WXQ8 436 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 LRRC45Q96CN5 670 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 FMO2Q99518 471 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 DEFB129Q9H1M3 183 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 INTUQ9ULD6 942 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 WDR64B1ANS9 1081 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 WDR46O15213 610 aaKnown RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 ATP2C2O75185 946 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 NR3C2P08235 984 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 RNF187Q5TA31 235 aaPredicted RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 FAM83AQ86UY5 434 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 TMEM161BQ8NDZ6 487 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 C1orf54Q8WWF1 131 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 TMEM143Q96AN5 459 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 ZNF668Q96K58 619 aaPredicted RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 CALR3Q96L12 384 aaKnown RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 TMBIM4Q9HC24 238 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 TMEM51Q9NW97 253 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 TRPC6Q9Y210 931 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 ADGRA3Q8IWK6 1321 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 SLC9A9Q8IVB4 645 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 CCDC105Q8IYK2 499 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 CCDC113Q9H0I3 377 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 TBC1D22BQ9NU19 505 aa18.36■□□□□ 0.53
RXRB-201ENST00000374680 CNOT8Q9UFF9 292 aaKnown RBP18.36■□□□□ 0.53
RXRB-201ENST00000374680 GOLGA6L10A0A0M3HER8 536 aa18.35■□□□□ 0.53
RXRB-201ENST00000374680 SSR1P43307 286 aaKnown RBP18.35■□□□□ 0.53
RXRB-201ENST00000374680 GTF2BQ00403 316 aa18.35■□□□□ 0.53
RXRB-201ENST00000374680 SCARA3Q6AZY7 606 aa18.35■□□□□ 0.53
RXRB-201ENST00000374680 TTC27Q6P3X3 843 aa18.35■□□□□ 0.53
RXRB-201ENST00000374680 SV2AQ7L0J3 742 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms