RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 SCHIP1Q9P0W5 487 aaPredicted RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 PRELID1Q9Y255 219 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 HBS1LQ9Y450 684 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 MAP3K4Q9Y6R4 1608 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 ARHGEF9O43307 516 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 PDE6AP16499 860 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 COPB2P35606 906 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 C21orf59P57076 290 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 CASC4Q6P4E1 433 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 ZSCAN10Q96SZ4 725 aaPredicted RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 DCUN1D5Q9BTE7 237 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 NACA2Q9H009 215 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 KIAA1683Q9H0B3 1180 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 APPL1Q9UKG1 709 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 ZFYVE16Q7Z3T8 1539 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 SGK1O00141 431 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 LPXNO60711 386 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 ITGA2BP08514 1039 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 RARGP13631 454 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 RPL5P46777 297 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 PMS1P54277 932 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 BNIP1Q12981 228 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 RASGRF1Q13972 1273 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 SGSM1Q2NKQ1 1148 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 CCDC14Q49A88 953 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 DCUN1D2Q6PH85 259 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 C6orf89Q6UWU4 347 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 GPR141Q7Z602 305 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 RFFLQ8WZ73 363 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 UPF3AQ9H1J1 476 aaKnown RBP10.88□□□□□ -0.67
CD28-202ENST00000374481 GINM1Q9NU53 330 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 SELENONQ9NZV5 590 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 ARHGAP20Q9P2F6 1191 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 ZNF232Q9UNY5 417 aa10.88□□□□□ -0.67
CD28-202ENST00000374481 RNF103-CHMP3A0A140T963 221 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 KCNQ3O43525 872 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 SEC24DO94855 1032 aaPredicted RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 LYNP07948 512 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 PYGMP11217 842 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 MAPK4P31152 587 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 KRT17Q04695 432 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CNPY1Q3B7I2 92 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 TLDC1Q6P9B6 456 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 LVRNQ6Q4G3 990 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 RBM44Q6ZP01 1051 aaKnown RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 NEK8Q86SG6 692 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CADPS2Q86UW7 1296 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 REXO1Q8N1G1 1221 aaKnown RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 GJA10Q969M2 543 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 L3MBTL3Q96JM7 780 aaPredicted RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 SYT15Q9BQS2 421 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 NRDE2Q9H7Z3 1164 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 PIDD1Q9HB75 910 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 PLGRKTQ9HBL7 147 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 STRIP2Q9ULQ0 834 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 RARAP10276 462 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 ACTRT1Q8TDG2 376 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CNOT8Q9UFF9 292 aaKnown RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 RPL26L1Q9UNX3 145 aaKnown RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 DNM3Q9UQ16 869 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 KIF1BO60333 1816 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 GOLGA8RI6L899 631 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 HDAC4P56524 1084 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 ITGA9Q13797 1035 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CCDC153Q494R4 210 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 ESCO1Q5FWF5 840 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 LMBRD2Q68DH5 695 aaPredicted RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 AFAP1L2Q8N4X5 818 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 UCMAQ8WVF2 138 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 MCM9Q9NXL9 1143 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 DOLKQ9UPQ8 538 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 PCDH11XQ9BZA7 1347 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 ADCY6O43306 1168 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 LDHAP00338 332 aaKnown RBP10.87□□□□□ -0.67
CD28-202ENST00000374481 ACTN1P12814 892 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 BMP6P22004 513 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CYP2J2P51589 502 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CCR3P51677 355 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 MAPK7Q13164 816 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 CNGA2Q16280 664 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 FSCBQ5H9T9 825 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 NAT14Q8WUY8 206 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 OMA1Q96E52 524 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 KCNK16Q96T55 309 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 AP4S1Q9Y587 144 aa10.87□□□□□ -0.67
CD28-202ENST00000374481 WDR19Q8NEZ3 1342 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 ERCC6L2Q5T890 1561 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 KDM4FA0A1W2PPD8 638 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 E9PMD0 336 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 MATN2O00339 956 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 SERPINI2O75830 405 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 TSPAN9O75954 239 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 GGPS1O95749 300 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 KRT3P12035 628 aa10.86□□□□□ -0.67
CD28-202ENST00000374481 SARSP49591 514 aaKnown RBP10.86□□□□□ -0.67
CD28-202ENST00000374481 PDAP1Q13442 181 aaKnown RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms