RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 KIAA1671Q9BY89 1806 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 MEIS3P2A8K0S8 358 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 SFI1A8K8P3 1242 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 SLC16A4O15374 487 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 NPTXRO95502 500 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 RNASELQ05823 741 aaKnown RBP13.23□□□□□ -0.29
HDAC8-201ENST00000373554 STRN3Q13033 797 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 CCDC85BQ15834 202 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-201ENST00000373554 NOMO2Q5JPE7 1267 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 AGMOQ6ZNB7 445 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 APBB1IPQ7Z5R6 666 aaPredicted RBP13.23□□□□□ -0.29
HDAC8-201ENST00000373554 THNSL1Q8IYQ7 743 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 PDILTQ8N807 584 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 COLGALT1Q8NBJ5 622 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 SMG8Q8ND04 991 aaKnown RBP13.23□□□□□ -0.29
HDAC8-201ENST00000373554 MRPL38Q96DV4 380 aaKnown RBP13.23□□□□□ -0.29
HDAC8-201ENST00000373554 ZNF558Q96NG5 402 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 APOL6Q9BWW8 343 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 LMAN2LQ9H0V9 348 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 NXF3Q9H4D5 531 aaKnown RBP13.23□□□□□ -0.29
HDAC8-201ENST00000373554 ZHX3Q9H4I2 956 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 PDZD7Q9H5P4 517 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 TMEM134Q9H6X4 195 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 PARVGQ9HBI0 331 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 HCSTQ9UBK5 93 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 HES2Q9Y543 173 aa13.23□□□□□ -0.29
HDAC8-201ENST00000373554 CARNS1A5YM72 827 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 OFD1O75665 1012 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 SCP2P22307 547 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 PPM1AP35813 382 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 DCAF4L1Q3SXM0 396 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 TIGD5Q53EQ6 642 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 ATF7IP2Q5U623 682 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 MYCT1Q8N699 235 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 SPATA32Q96LK8 384 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 NTPCRQ9BSD7 190 aaKnown RBP13.22□□□□□ -0.29
HDAC8-201ENST00000373554 MRPL4Q9BYD3 311 aaKnown RBP13.22□□□□□ -0.29
HDAC8-201ENST00000373554 CWH43Q9H720 699 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 FAM13BQ9NYF5 915 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 KANSL3Q9P2N6 904 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 TRANK1O15050 2925 aa13.22□□□□□ -0.29
HDAC8-201ENST00000373554 ZMYM2Q9UBW7 1377 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 A0A087X0B3 334 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 TTLL13PA6NNM8 815 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 K7ENM7 598 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 GRM6O15303 877 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 ZC3H11AO75152 810 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDAC8-201ENST00000373554 EDN1P05305 212 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 ITGB1P05556 798 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 MLH1P40692 756 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 ALDH7A1P49419 539 aaKnown RBP13.21□□□□□ -0.29
HDAC8-201ENST00000373554 ZNF131P52739 623 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 NUCB2P80303 420 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 GIT2Q14161 759 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 SKIV2LQ15477 1246 aaKnown RBP13.21□□□□□ -0.29
HDAC8-201ENST00000373554 AXDND1Q5T1B0 1012 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-201ENST00000373554 SHC4Q6S5L8 630 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 KCNT2Q6UVM3 1135 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 DYMQ7RTS9 669 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 TMEM161BQ8NDZ6 487 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 FAM193BQ96PV7 902 aaPredicted RBP13.21□□□□□ -0.29
HDAC8-201ENST00000373554 PANK2Q9BZ23 570 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 GBP3Q9H0R5 595 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 CUEDC2Q9H467 287 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 ALG13Q9NP73 1137 aaKnown RBP13.21□□□□□ -0.29
HDAC8-201ENST00000373554 RCOR1Q9UKL0 485 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 PCDHA7Q9UN72 937 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 PLAGL2Q9UPG8 496 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 USP20Q9Y2K6 914 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 GIT1Q9Y2X7 761 aa13.21□□□□□ -0.29
HDAC8-201ENST00000373554 ARL5CA6NH57 179 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 TRAK2O60296 914 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 FGF18O76093 207 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 CSPG5O95196 566 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 POMCP01189 267 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 MAPTP10636 758 aaKnown RBP13.2□□□□□ -0.3
HDAC8-201ENST00000373554 AKAP5P24588 427 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 ABCD1P33897 745 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 PBX3P40426 434 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 NCKAP1LP55160 1127 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 KRT17Q04695 432 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 UBE3AQ05086 875 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 ZNF568Q3ZCX4 644 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 NT5DC1Q5TFE4 455 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 EEF1DP3Q658K8 133 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 TAS1R3Q7RTX0 852 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 FAM178BQ8IXR5 827 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 IQUBQ8NA54 791 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 LEO1Q8WVC0 666 aaPredicted RBP13.2□□□□□ -0.3
HDAC8-201ENST00000373554 DDX12PQ92771 950 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 DHX58Q96C10 678 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 GAD1Q99259 594 aa13.2□□□□□ -0.3
HDAC8-201ENST00000373554 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
HDAC8-201ENST00000373554 LRRC27Q9C0I9 530 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms