RNA–Protein interactions for RNA: ENST00000373489.9

PBX3-204, Transcript of PBX homeobox 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PBX3, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-204ENST00000373489 USP40Q9NVE5 1235 aa17.21■□□□□ 0.35
PBX3-204ENST00000373489 PCDHA2Q9Y5H9 948 aa17.21■□□□□ 0.35
PBX3-204ENST00000373489 CLIC2O15247 247 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 CNGA1P29973 690 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 FOXN2P32314 431 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 TSNAXIP1Q2TAA8 658 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 C12orf60Q5U649 245 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 ZNF444Q8N0Y2 327 aaPredicted RBP17.2■□□□□ 0.34
PBX3-204ENST00000373489 SPOCK2Q92563 424 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 SH3BP1Q9Y3L3 701 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 ALG6Q9Y672 507 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 AKAP3O75969 853 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 STAT1P42224 750 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 EPHA7Q15375 998 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 PPP2R5EQ16537 467 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 RNF43Q68DV7 783 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 MFSD5Q6N075 450 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 MTHFD1LQ6UB35 978 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 RPUSD2Q8IZ73 545 aaKnown RBP17.2■□□□□ 0.34
PBX3-204ENST00000373489 DRAXINQ8NBI3 349 aaPredicted RBP17.2■□□□□ 0.34
PBX3-204ENST00000373489 ASAP3Q8TDY4 903 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 PWWP2AQ96N64 755 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 METTL5Q9NRN9 209 aaKnown RBP17.2■□□□□ 0.34
PBX3-204ENST00000373489 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
PBX3-204ENST00000373489 PCDHB13Q9Y5F0 798 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 UBR3Q6ZT12 1888 aa17.2■□□□□ 0.34
PBX3-204ENST00000373489 POTEB3A0JP26 581 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 POTECB2RU33 542 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
PBX3-204ENST00000373489 SETDB1Q15047 1291 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 KYNUQ16719 465 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 POTEBQ6S5H4 581 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 ITFG2Q969R8 447 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 BORCS6Q96GS4 357 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 DENND2DQ9H6A0 471 aaPredicted RBP17.19■□□□□ 0.34
PBX3-204ENST00000373489 RGL1Q9NZL6 768 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 CHKBQ9Y259 395 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 PLA2G4BP0C869 781 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 CHRNA3P32297 505 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 CHKAP35790 457 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 DNAJC3Q13217 504 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 RRP1BQ14684 758 aaKnown RBP17.19■□□□□ 0.34
PBX3-204ENST00000373489 MTFR1Q15390 333 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 BCAS3Q9H6U6 928 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 PCDHA3Q9Y5H8 950 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 MAST2Q6P0Q8 1798 aa17.19■□□□□ 0.34
PBX3-204ENST00000373489 TAC1P20366 129 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 JAM2P57087 298 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 USP4Q13107 963 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 RCN2Q14257 317 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 PDIA5Q14554 519 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 LBRQ14739 615 aaKnown RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 UBE2SQ16763 222 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 ANKRD27Q96NW4 1050 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 GORASP1Q9BQQ3 440 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 LRMDAQ9H2I8 198 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 IKZF4Q9H2S9 585 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 PCMTD2Q9NV79 361 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 PARP2Q9UGN5 583 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 PODXLO00592 558 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 SKIV2L2P42285 1042 aaKnown RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 TRIP13Q15645 432 aaPredicted RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 GRIK5Q16478 980 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 FOXB2Q5VYV0 432 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 APBB1IPQ7Z5R6 666 aaPredicted RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 CPNE8Q86YQ8 564 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 FBXO41Q8TF61 875 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 LRRC37BQ96QE4 947 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 ROPN1BQ9BZX4 212 aaPredicted RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 NT5C3AQ9H0P0 336 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 ROPN1Q9HAT0 212 aaPredicted RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 SLCO1B3Q9NPD5 702 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 NMRK1Q9NWW6 199 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 NKIRAS1Q9NYS0 192 aa17.18■□□□□ 0.34
PBX3-204ENST00000373489 SAP30BPQ9UHR5 308 aaKnown RBP17.18■□□□□ 0.34
PBX3-204ENST00000373489 SMAPO00193 183 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 SERPINB2P05120 415 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 TMEM253P0C7T8 217 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 RASA1P20936 1047 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 CALCOCO2Q13137 446 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 CCDC6Q16204 474 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 PARP6Q2NL67 630 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 PRR5LQ6MZQ0 368 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.17■□□□□ 0.34
PBX3-204ENST00000373489 KIFAP3Q92845 792 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 ART4Q93070 314 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 INTUQ9ULD6 942 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 DIS3Q9Y2L1 958 aaKnown RBP17.17■□□□□ 0.34
PBX3-204ENST00000373489 PITPNM2Q9BZ72 1349 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 LDHBP07195 334 aaKnown RBP17.17■□□□□ 0.34
PBX3-204ENST00000373489 CETPP11597 493 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 ARHGAP44Q17R89 818 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 ZC3H12AQ5D1E8 599 aaKnown RBP17.17■□□□□ 0.34
PBX3-204ENST00000373489 RBM26Q5T8P6 1007 aaKnown RBP17.17■□□□□ 0.34
PBX3-204ENST00000373489 OR52E8Q6IFG1 317 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 FOXR2Q6PJQ5 311 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 PRUNE1Q86TP1 453 aa17.17■□□□□ 0.34
PBX3-204ENST00000373489 AGGF1Q8N302 714 aaeCLIP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms