RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 UBA6A0AVT1 1052 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 A8MXQ7 604 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 SRGAP2O75044 1071 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 KRT8P05787 483 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 HOXD10P28358 340 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 DAB2P98082 770 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 WASHC5Q12768 1159 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 FASTKD1Q53R41 847 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 MMS22LQ6ZRQ5 1243 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 NUDT18Q6ZVK8 323 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 CATSPER1Q8NEC5 780 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 ASAP3Q8TDY4 903 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 FAM161BQ96MY7 647 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 TSSK1BQ9BXA7 367 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 GABBR1Q9UBS5 961 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 SRP68Q9UHB9 627 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 APOL1O14791 398 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 MYCP01106 439 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 FTLP02792 175 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 PRCPP42785 496 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 ARHGAP18Q8N392 663 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 DHX35Q9H5Z1 703 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 FAM217BQ9NTX9 383 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 AFF4Q9UHB7 1163 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 ZNF335Q9H4Z2 1342 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 PALLDQ8WX93 1383 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 USP17L10C9JJH3 530 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 FOXP2O15409 715 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 ZSCAN9O15535 394 aaPredicted RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 SASH1O94885 1247 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 TYK2P29597 1187 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 DHX34Q14147 1143 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 THEMIS2Q5TEJ8 643 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 SWSAP1Q6NVH7 229 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 MTHFD1LQ6UB35 978 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 MMP19Q99542 508 aa12.22□□□□□ -0.45
VCL-202ENST00000372755 MAP3K20Q9NYL2 800 aaKnown RBP12.22□□□□□ -0.45
VCL-202ENST00000372755 SYNDIG1LA6NDD5 238 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 ABCE1P61221 599 aaKnown RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 FAM102AQ5T9C2 384 aaPredicted RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 OR6P1Q8NGX9 317 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 TAF1DQ9H5J8 278 aaPredicted RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 DCTN4Q9UJW0 460 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 NEDD4P46934 1319 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 PTCH1Q13635 1447 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 NLRP1Q9C000 1473 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 RARS2Q5T160 578 aaKnown RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 APOBEC3FQ8IUX4 373 aaKnown RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 PPHLN1Q8NEY8 458 aaKnown RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 WRNIP1Q96S55 665 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 SPON2Q9BUD6 331 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 SLC7A5P2Q9GIP4 190 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 RUBCNLQ9H714 662 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 PLEKHG2Q9H7P9 1386 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 CFAP73A6NFT4 308 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 CD2BP2O95400 341 aaKnown RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 MOCS2O96007 188 aaPredicted RBP12.21□□□□□ -0.45
VCL-202ENST00000372755 SERPINB4P48594 390 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 CDK17Q00537 523 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 LRRC8EQ6NSJ5 796 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 ECT2Q9H8V3 914 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 SLC4A7Q9Y6M7 1214 aa12.21□□□□□ -0.45
VCL-202ENST00000372755 PSMD3O43242 534 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 MRPS25P82663 173 aaKnown RBP12.21□□□□□ -0.46
VCL-202ENST00000372755 MFSD14CQ5VZR4 134 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 KIRREL3Q8IZU9 778 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 ARHGEF1Q92888 912 aaKnown RBP12.21□□□□□ -0.46
VCL-202ENST00000372755 AIPL1Q9NZN9 384 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 POTEB3A0JP26 581 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 CFAP69A5D8W1 941 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 POTECB2RU33 542 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L15C9J2P7 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L13C9JLJ4 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L11C9JVI0 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L18D6R9N7 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L22D6RA61 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L17D6RBQ6 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L19D6RCP7 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L20D6RJB6 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.46
VCL-202ENST00000372755 VCPP55072 806 aaKnown RBP12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L24Q0WX57 530 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 IZUMO3Q5VZ72 239 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 USP17L6PQ6QN14 398 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 POTEBQ6S5H4 581 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 WWP1Q9H0M0 922 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 GCC2Q8IWJ2 1684 aa12.21□□□□□ -0.46
VCL-202ENST00000372755 CYP2D6P10635 497 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 SLC1A1P43005 524 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 GRIN1Q05586 938 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 ZNF211Q13398 564 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 CC2D1AQ6P1N0 951 aaPredicted RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 CCDC137Q6PK04 289 aaKnown RBP12.2□□□□□ -0.46
VCL-202ENST00000372755 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 SCFD1Q8WVM8 642 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 DCUN1D1Q96GG9 259 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 TNIP3Q96KP6 325 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 RPS6KA4O75676 772 aa12.2□□□□□ -0.46
VCL-202ENST00000372755 CPB1P15086 417 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms