RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 MICALL2Q8IY33 904 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 WDR24Q96S15 920 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 FGFR1OP2Q9NVK5 253 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 HSPA8P11142 646 aaKnown RBP11.17□□□□□ -0.62
NUP188-201ENST00000372577 HMGCS2P54868 508 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 SYT2Q8N9I0 419 aaPredicted RBP11.17□□□□□ -0.62
NUP188-201ENST00000372577 KLHL29Q96CT2 875 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 NUDCD1Q96RS6 583 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 ZBTB24O43167 697 aaPredicted RBP11.17□□□□□ -0.62
NUP188-201ENST00000372577 FXR1P51114 621 aaKnown RBP eCLIP11.17□□□□□ -0.625e-6■■■□□ 17
NUP188-201ENST00000372577 PSMC1P62191 440 aaKnown RBP11.17□□□□□ -0.62
NUP188-201ENST00000372577 ZNF677Q86XU0 584 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 CDKL3Q8IVW4 592 aaPredicted RBP11.17□□□□□ -0.62
NUP188-201ENST00000372577 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
NUP188-201ENST00000372577 TCRBV5S4A2TA0A5A2 114 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 ACSL3O95573 720 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 NR3C2P08235 984 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 ZNF18P17022 549 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 USP49Q70CQ1 688 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 SEPT1Q8WYJ6 367 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 GPRASP2Q96D09 838 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 SMARCAD1Q9H4L7 1026 aa11.17□□□□□ -0.62
NUP188-201ENST00000372577 M0QYV0 167 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 MAGEB2O15479 319 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 PRKCBP05771 671 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 IL1R1P14778 569 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 PPARGP37231 505 aaPredicted RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 GGCXP38435 758 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 SF3A3Q12874 501 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■■□ 22.6
NUP188-201ENST00000372577 FIGNQ5HY92 759 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 CCDC137Q6PK04 289 aaKnown RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 MOV10L1Q9BXT6 1211 aaKnown RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 CACYBPQ9HB71 228 aaKnown RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 ANKRD26Q9UPS8 1709 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 CTIFO43310 598 aaKnown RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 PPP2R2AP63151 447 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 TSPY1Q01534 308 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 BAATQ14032 418 aaPredicted RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 MTF1Q14872 753 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 MMEL1Q495T6 779 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 A0A0G2JLW4 131 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 TXNDC9O14530 226 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 NCK2O43639 380 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 GAS2O43903 313 aaKnown RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 GYPCP04921 128 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 SAT1P21673 171 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 GMCL1P1Q8NEA9 526 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 HDAC11Q96DB2 347 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 CFAP36Q96G28 342 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 GMCL1Q96IK5 515 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 RNPC3Q96LT9 517 aaKnown RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 FOXP3Q9BZS1 431 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 EPS15L1Q9UBC2 864 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 TBK1Q9UHD2 729 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 MMEP08473 750 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 ZKSCAN8Q15776 578 aaPredicted RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 KIAA1841Q6NSI8 718 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 KLC3Q6P597 504 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 LRIG3Q6UXM1 1119 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 TRAPPC11Q7Z392 1133 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 OTUD5Q96G74 571 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 CHP1Q99653 195 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 RTFDC1Q9BY42 306 aaPredicted RBP11.16□□□□□ -0.62
NUP188-201ENST00000372577 FAM129AQ9BZQ8 928 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 PPCSQ9HAB8 311 aa11.16□□□□□ -0.62
NUP188-201ENST00000372577 NPHP3-ACAD11A0A0J9YXS1 232 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 TMEM253P0C7T8 217 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 NFKBIAP25963 317 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 Q3C1V9 767 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 ZNF394Q53GI3 561 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 TAF1BQ53T94 588 aaPredicted RBP11.15□□□□□ -0.62
NUP188-201ENST00000372577 TRIM59Q8IWR1 403 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 VPS39Q96JC1 886 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 ATP6V1G3Q96LB4 118 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 RNF181Q9P0P0 153 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 SENP1Q9P0U3 644 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 HDAC6Q9UBN7 1215 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 IGSF9BQ9UPX0 1349 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 IL18RAPO95256 599 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 EN1Q05925 392 aaPredicted RBP11.15□□□□□ -0.62
NUP188-201ENST00000372577 PSMD6Q15008 389 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 SNRNP35Q16560 246 aaKnown RBP11.15□□□□□ -0.62
NUP188-201ENST00000372577 CDO1Q16878 200 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 PASD1Q8IV76 773 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 RCOR2Q8IZ40 523 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 HAUS8Q9BT25 410 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 DDX47Q9H0S4 455 aaKnown RBP11.15□□□□□ -0.62
NUP188-201ENST00000372577 TMEM8AQ9HCN3 771 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 ZBTB7AO95365 584 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 MAP2K2P36507 400 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 CDK17Q00537 523 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 NTRK3Q16288 839 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 SGSM1Q2NKQ1 1148 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 TWF2Q6IBS0 349 aaKnown RBP11.15□□□□□ -0.62
NUP188-201ENST00000372577 ATL2Q8NHH9 583 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.15□□□□□ -0.62
NUP188-201ENST00000372577 COPEO14579 308 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 ICAM1P05362 532 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 TNIP3Q96KP6 325 aa11.15□□□□□ -0.62
NUP188-201ENST00000372577 SPDYE16A6NNV3 312 aaPredicted RBP11.15□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms