RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 B4GALT5O43286 388 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 FGFR1OPO95684 399 aaKnown RBP17.34■□□□□ 0.37
TMEM53-204ENST00000372243 PROZP22891 400 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 ATF7IP2Q5U623 682 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 FAM228AQ86W67 206 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 CSGALNACT2Q8N6G5 542 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 NOC3LQ8WTT2 800 aaKnown RBP17.34■□□□□ 0.37
TMEM53-204ENST00000372243 CEP63Q96MT8 703 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 HIPK3Q9H422 1215 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 PTPRHQ9HD43 1115 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 AGPAT5Q9NUQ2 364 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 DMAC2Q9NW81 257 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 NFE2L3Q9Y4A8 694 aa17.34■□□□□ 0.37
TMEM53-204ENST00000372243 TANC1Q9C0D5 1861 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 TTLL13PA6NNM8 815 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 NR3C1P04150 777 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 ARF4P18085 180 aaPredicted RBP17.33■□□□□ 0.37
TMEM53-204ENST00000372243 NR2F2P24468 414 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 ADSSP30520 456 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 ADAM9Q13443 819 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 LPIN1Q14693 890 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 TPD52L1Q16890 204 aaPredicted RBP17.33■□□□□ 0.37
TMEM53-204ENST00000372243 ARMCX5Q6P1M9 558 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 LUZP1Q86V48 1076 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 RBSNQ9H1K0 784 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 THAP9Q9H5L6 903 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 TMEM39AQ9NV64 488 aa17.33■□□□□ 0.37
TMEM53-204ENST00000372243 TISP43B9A030 160 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 ABLIM1O14639 778 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 N4BP3O15049 544 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 CETN3O15182 167 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 CLIC2O15247 247 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 CLDN3O15551 220 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 FGFR4P22455 802 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 HOXA11P31270 313 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-204ENST00000372243 HSP90AA2PQ14568 343 aaPredicted RBP17.32■□□□□ 0.36
TMEM53-204ENST00000372243 MPZL3Q6UWV2 235 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 LRRC55Q6ZSA7 311 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 POMGNT1Q8WZA1 660 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 CCDC51Q96ER9 411 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 SRRTQ9BXP5 876 aaKnown RBP17.32■□□□□ 0.36
TMEM53-204ENST00000372243 CHST12Q9NRB3 414 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 ST3GAL5Q9UNP4 418 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 USP20Q9Y2K6 914 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 A0A0B4J269 797 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 GOLGA6L19H0YKK7 550 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 KIAA0355O15063 1070 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 GHRP10912 638 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 TPM4P67936 248 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 MCL1Q07820 350 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 MBTPS1Q14703 1052 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 NOTUMQ6P988 496 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 FILIP1Q7Z7B0 1213 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 RNF214Q8ND24 703 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 CBWD1Q9BRT8 395 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 MKNK1Q9BUB5 465 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 AGO3Q9H9G7 860 aaKnown RBP17.32■□□□□ 0.36
TMEM53-204ENST00000372243 ERVK-5Q9HDB9 667 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 FANCLQ9NW38 375 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 HSPBP1Q9NZL4 362 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 PADI3Q9ULW8 664 aa17.32■□□□□ 0.36
TMEM53-204ENST00000372243 GNA14O95837 355 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 LDHAP00338 332 aaKnown RBP17.31■□□□□ 0.36
TMEM53-204ENST00000372243 PAK2Q13177 524 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 TMEM132AQ24JP5 1023 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 CDKAL1Q5VV42 579 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 APBB1IPQ7Z5R6 666 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-204ENST00000372243 XXYLT1Q8NBI6 393 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 ZBTB45Q96K62 511 aaPredicted RBP17.31■□□□□ 0.36
TMEM53-204ENST00000372243 FBXL18Q96ME1 805 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 TCHPQ9BT92 498 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 HAPLN2Q9GZV7 340 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 HSD3B7Q9H2F3 369 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 KIAA1586Q9HCI6 787 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 SAMSN1Q9NSI8 373 aaKnown RBP17.31■□□□□ 0.36
TMEM53-204ENST00000372243 ANKFY1Q9P2R3 1169 aa17.31■□□□□ 0.36
TMEM53-204ENST00000372243 UMODL1Q5DID0 1318 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 MAPK13O15264 365 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 SLC16A3O15427 465 aaKnown RBP17.3■□□□□ 0.36
TMEM53-204ENST00000372243 MCF2P10911 925 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 ZNF18P17022 549 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 CD52P31358 61 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 MARSP56192 900 aaKnown RBP17.3■□□□□ 0.36
TMEM53-204ENST00000372243 NOLC1Q14978 699 aaKnown RBP eCLIP17.3■□□□□ 0.363e-11■□□□□ 9.8
TMEM53-204ENST00000372243 ZNF568Q3ZCX4 644 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 SLC27A1Q6PCB7 646 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 FAM114A1Q8IWE2 563 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 CPB2Q96IY4 423 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 ADPGKQ9BRR6 497 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 OSBPL7Q9BZF2 842 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 WNT8AQ9H1J5 351 aa17.3■□□□□ 0.36
TMEM53-204ENST00000372243 AGO2Q9UKV8 859 aaKnown RBP17.3■□□□□ 0.36
TMEM53-204ENST00000372243 PIN4Q9Y237 131 aaKnown RBP17.3■□□□□ 0.36
TMEM53-204ENST00000372243 ALPK3Q96L96 1907 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 EXOC3O60645 756 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 RFC2P35250 354 aa17.29■□□□□ 0.36
TMEM53-204ENST00000372243 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
TMEM53-204ENST00000372243 NFX1Q12986 1120 aaKnown RBP17.29■□□□□ 0.36
TMEM53-204ENST00000372243 GPNMBQ14956 572 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms