RNA–Protein interactions for RNA: ENST00000372232.7

ATG4A-203, Transcript of autophagy related 4A cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4A, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-203ENST00000372232 DGKHQ86XP1 1220 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 CXorf38Q8TB03 319 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 ATP8B4Q8TF62 1192 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 WDR60Q8WVS4 1066 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 CENPTQ96BT3 561 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 GPR101Q96P66 508 aaPredicted RBP9.52□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF408Q9H9D4 720 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 IL17RBQ9NRM6 502 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 HSFX1Q9UBD0 423 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 SERTAD1Q9UHV2 236 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF148Q9UQR1 794 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 COMMD3-BMI1R4GMX3 469 aa9.52□□□□□ -0.89
ATG4A-203ENST00000372232 TRIM43BA6NCK2 446 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 P4HA2O15460 535 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 TEX33O43247 280 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 GNA14O95837 355 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 BMP15O95972 392 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 GYPCP04921 128 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 HNRNPCP07910 306 aaKnown RBP eCLIP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 SCG2P13521 617 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CALB2P22676 271 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 GALNTL6Q49A17 601 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 DMRTA1Q5VZB9 504 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 THOC7Q6I9Y2 204 aaKnown RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 KANK3Q6NY19 840 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 TMEM53Q6P2H8 277 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 NANOGNBQ7Z5D8 188 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 FAM160A2Q8N612 972 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 IRGQQ8WZA9 623 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 ANKS1AQ92625 1134 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 DYNLL2Q96FJ2 89 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 RNPEPL1Q9HAU8 725 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CD209Q9NNX6 404 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 PDP2Q9P2J9 529 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 TRIM10Q9UDY6 481 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 LNPEPQ9UIQ6 1025 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 MAST2Q6P0Q8 1798 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 MYH13Q9UKX3 1938 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 WNT7AO00755 349 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 ZNF185O15231 689 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 DXOO77932 396 aaKnown RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 SERPINB2P05120 415 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 LDHCP07864 332 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 VDRP11473 427 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 TMOD1P28289 359 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 KRT9P35527 623 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 FXR1P51114 621 aaKnown RBP eCLIP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 SCNN1DP51172 638 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 EPHA4P54764 986 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 PSMC1P62191 440 aaKnown RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 PFKFB3Q16875 520 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 P3H1Q32P28 736 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 SMUG1Q53HV7 270 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 HSP90AA4PQ58FG1 418 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 FAM133BQ5BKY9 247 aaKnown RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 AGBL2Q5U5Z8 902 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CREG2Q8IUH2 290 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.51□□□□□ -0.898e-6■■■■■ 46.4
ATG4A-203ENST00000372232 NOC3LQ8WTT2 800 aaKnown RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 TGFBRAP1Q8WUH2 860 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CPLX3Q8WVH0 158 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 FOXJ1Q92949 421 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 FERMT2Q96AC1 680 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 ABHD8Q96I13 439 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CLMNQ96JQ2 1002 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 ROBO3Q96MS0 1386 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 GBP5Q96PP8 586 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 NR1H4Q96RI1 486 aaPredicted RBP9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CCDC28BQ9BUN5 200 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 KIAA1551Q9HCM1 1747 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 PLCB1Q9NQ66 1216 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 GDF3Q9NR23 364 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 ABHD10Q9NUJ1 306 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 CTTNBP2NLQ9P2B4 639 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 MAN1B1Q9UKM7 699 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 DLEC1Q9Y238 1755 aa9.51□□□□□ -0.89
ATG4A-203ENST00000372232 A0A0J9YVX5 310 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 HTR3EA5X5Y0 456 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 BACH1O14867 736 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 LSM1O15116 133 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 BIRC5O15392 142 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 UFL1O94874 794 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ASLP04424 464 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 IL1R1P14778 569 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 VEGFAP15692 232 aaPredicted RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 USP11P51784 963 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 NEK2P51955 445 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 PLS1Q14651 629 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ERMARDQ5T6L9 678 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 DUS1LQ6P1R4 473 aaKnown RBP9.5□□□□□ -0.89
ATG4A-203ENST00000372232 POTEEQ6S8J3 1075 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 ASRGL1Q7L266 308 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 LONP2Q86WA8 852 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 GJD3Q8N144 294 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SPATA4Q8NEY3 305 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 SPATA20Q8TB22 786 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 DEPTORQ8TB45 409 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 DNAJC9Q8WXX5 260 aa9.5□□□□□ -0.89
ATG4A-203ENST00000372232 TRIM11Q96F44 468 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms