RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 KIF3AQ9Y496 699 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 POTEMA6NI47 508 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 ZBTB39O15060 712 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 OR52Z1P0C646 297 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 GLRA2P23416 452 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 HOXD11P31277 338 aaPredicted RBP17.9■□□□□ 0.46
VMA21-202ENST00000370361 GNL2Q13823 731 aaKnown RBP17.9■□□□□ 0.46
VMA21-202ENST00000370361 PTPN14Q15678 1187 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 PTPN21Q16825 1174 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 LONRF3Q496Y0 759 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 ATAT1Q5SQI0 421 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 KIAA1841Q6NSI8 718 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 SLC27A1Q6PCB7 646 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 CYP26C1Q6V0L0 522 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 PPP4R3CPQ6ZMV5 832 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 HFE2Q6ZVN8 426 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 TMEM173Q86WV6 379 aaPredicted RBP17.9■□□□□ 0.46
VMA21-202ENST00000370361 ZNF280BQ86YH2 543 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 ZBTB8OSQ8IWT0 167 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 PLCD3Q8N3E9 789 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 FAM184AQ8NB25 1140 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 SMG8Q8ND04 991 aaKnown RBP17.9■□□□□ 0.46
VMA21-202ENST00000370361 RAB34Q9BZG1 259 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 POLR3FQ9H1D9 316 aaPredicted RBP17.9■□□□□ 0.46
VMA21-202ENST00000370361 SFXN1Q9H9B4 322 aa17.9■□□□□ 0.46
VMA21-202ENST00000370361 PRMT7Q9NVM4 692 aaPredicted RBP17.9■□□□□ 0.46
VMA21-202ENST00000370361 TMEM221A6NGB7 291 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 ARL5CA6NH57 179 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 M0R296 226 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 DDHD2O94830 711 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 SOD2P04179 222 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 URODP06132 367 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 SPATA31C1P0DKV0 1188 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 ARF4P18085 180 aaPredicted RBP17.89■□□□□ 0.45
VMA21-202ENST00000370361 DSC1Q08554 894 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 ST3GAL1Q11201 340 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 PPP2R5AQ15172 486 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 AMHR2Q16671 573 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 FAM187BQ17R55 369 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 CDCA2Q69YH5 1023 aaPredicted RBP17.89■□□□□ 0.45
VMA21-202ENST00000370361 CABP7Q86V35 215 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 CATSPER3Q86XQ3 398 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 NOSTRINQ8IVI9 506 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 CCDC83Q8IWF9 413 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 COLGALT2Q8IYK4 626 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 UBALD2Q8IYN6 164 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 ASAP3Q8TDY4 903 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 PIGOQ8TEQ8 1089 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 SLC22A17Q8WUG5 538 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 TMEM60Q9H2L4 133 aa17.89■□□□□ 0.45
VMA21-202ENST00000370361 MUC6Q6W4X9 2439 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 A0A1B0GUA9 196 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 NRP1O14786 923 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 USO1O60763 962 aaKnown RBP17.88■□□□□ 0.45
VMA21-202ENST00000370361 POMCP01189 267 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 ATP2B1P20020 1258 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 CREMQ03060 361 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 SUGP1Q8IWZ8 645 aaKnown RBP17.88■□□□□ 0.45
VMA21-202ENST00000370361 HERC2P3Q9BVR0 1158 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 COLEC11Q9BWP8 271 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 RHOBTB2Q9BYZ6 727 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 TECTAO75443 2155 aa17.88■□□□□ 0.45
VMA21-202ENST00000370361 ARHGEF35A5YM69 484 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 LRRIQ4A6NIV6 560 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 LAD1O00515 517 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 N4BP3O15049 544 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 ADH1AP07327 375 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 KLRC2P26717 231 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 MLH1P40692 756 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 FXR2P51116 673 aaKnown RBP eCLIP17.87■□□□□ 0.45
VMA21-202ENST00000370361 FOSBP53539 338 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 GRIK3Q13003 919 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 TTC38Q5R3I4 469 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 C15orf39Q6ZRI6 1047 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 APBB1IPQ7Z5R6 666 aaPredicted RBP17.87■□□□□ 0.45
VMA21-202ENST00000370361 ZBTB33Q86T24 672 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 ZDHHC14Q8IZN3 488 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 HDAC7Q8WUI4 952 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 BCL7CQ8WUZ0 217 aaPredicted RBP17.87■□□□□ 0.45
VMA21-202ENST00000370361 PBXIP1Q96AQ6 731 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 FBXL18Q96ME1 805 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 GAD1Q99259 594 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 EIF2AQ9BY44 585 aaKnown RBP17.87■□□□□ 0.45
VMA21-202ENST00000370361 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.87■□□□□ 0.45
VMA21-202ENST00000370361 PHLPP2Q6ZVD8 1323 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 ZNF318Q5VUA4 2279 aa17.87■□□□□ 0.45
VMA21-202ENST00000370361 TDRD15B5MCY1 1934 aaKnown RBP17.86■□□□□ 0.45
VMA21-202ENST00000370361 SPDYE4A6NLX3 237 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 WNT7AO00755 349 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 DTNBO60941 627 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 LILRB3O75022 631 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 CYP11B2P19099 503 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 NAMPTP43490 491 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 OR1G1P47890 313 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 CLCN4P51793 760 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 EFNA5P52803 228 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 NUBP1P53384 320 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 MTMR3Q13615 1198 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 PDIA5Q14554 519 aa17.86■□□□□ 0.45
VMA21-202ENST00000370361 MAPK6Q16659 721 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms