RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 CCP110O43303 1012 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 MSCO60682 206 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 TRPA1O75762 1119 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 MYL3P08590 195 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 MATR3P43243 847 aaKnown RBP eCLIP18.29■□□□□ 0.52
PHGDH-202ENST00000369409 PPP3CAQ08209 521 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 MAPK6Q16659 721 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 PPP1R13LQ8WUF5 828 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 MRPL4Q9BYD3 311 aaKnown RBP18.29■□□□□ 0.52
PHGDH-202ENST00000369409 SIX2Q9NPC8 291 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 AGO2Q9UKV8 859 aaKnown RBP18.29■□□□□ 0.52
PHGDH-202ENST00000369409 PLAGL2Q9UPG8 496 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 Q9Y3F1 56 aa18.29■□□□□ 0.52
PHGDH-202ENST00000369409 THSD7BQ9C0I4 1608 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 ASAP2O43150 1006 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 ZSCAN12O43309 604 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 VTNP04004 478 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 TMOD1P28289 359 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 GCLMP48507 274 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 CYP24A1Q07973 514 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 MARCH8Q5T0T0 291 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 KLHDC7AQ5VTJ3 777 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 SLFN12LQ6IEE8 588 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 TRIM65Q6PJ69 517 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 LMBR1Q8WVP7 490 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 CCDC127Q96BQ5 260 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 MSTO1Q9BUK6 570 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 SETD4Q9NVD3 440 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 FHOD1Q9Y613 1164 aa18.28■□□□□ 0.52
PHGDH-202ENST00000369409 INO80B-WBP1J3KQ70 363 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 EXTL3O43909 919 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 N4BP1O75113 896 aaKnown RBP18.27■□□□□ 0.52
PHGDH-202ENST00000369409 CCDC175P0C221 793 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 HARSP12081 509 aaKnown RBP18.27■□□□□ 0.52
PHGDH-202ENST00000369409 UCHL3P15374 230 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 HNRNPH3P31942 346 aaKnown RBP18.27■□□□□ 0.52
PHGDH-202ENST00000369409 NLRP11P59045 1033 aaKnown RBP18.27■□□□□ 0.52
PHGDH-202ENST00000369409 PTENP60484 403 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 TRIM32Q13049 653 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 MFSD10Q14728 455 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 FSCN1Q16658 493 aaKnown RBP18.27■□□□□ 0.52
PHGDH-202ENST00000369409 ZPBP2Q6X784 338 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 ACRBPQ8NEB7 543 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 PARD3BQ8TEW8 1205 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 MFSD14AQ96MC6 490 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 INO80BQ9C086 356 aaPredicted RBP18.27■□□□□ 0.52
PHGDH-202ENST00000369409 RNF186Q9NXI6 227 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 ADGRG1Q9Y653 693 aa18.27■□□□□ 0.52
PHGDH-202ENST00000369409 LRRIQ3A6PVS8 624 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 KIAA0391O15091 583 aaKnown RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 OFD1O75665 1012 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 PHKA2P46019 1235 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 CENPFP49454 3210 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 MXI1P50539 228 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 MBTD1Q05BQ5 628 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 RAPGEF1Q13905 1077 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 NYAP1Q6ZVC0 841 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 REXO1L1PQ8IX06 675 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 MAP7D2Q96T17 732 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 CFHR5Q9BXR6 569 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 INTS2Q9H0H0 1204 aaKnown RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 MINDY3Q9H8M7 445 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 KIAA1586Q9HCI6 787 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 AJAP1Q9UKB5 411 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 A0A087WZ62 844 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 A0A0B4J269 797 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 MYADML2A6NDP7 307 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 RRN3P2A6NIE6 340 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 ZNF233A6NK53 670 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 DUSP11O75319 330 aaKnown RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 ACOT2P49753 483 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 VEGFBP49765 207 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 PSEN2P49810 448 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 HTRA3P83110 453 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 CDK17Q00537 523 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 GJB7Q6PEY0 223 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 CD99L2Q8TCZ2 262 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 TMC2Q8TDI7 906 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 ACO2Q99798 780 aaKnown RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 FDXACB1Q9BRP7 624 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 IFT122Q9HBG6 1241 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 TOPORSQ9NS56 1045 aaPredicted RBP18.26■□□□□ 0.51
PHGDH-202ENST00000369409 ANK1P16157 1881 aa18.26■□□□□ 0.51
PHGDH-202ENST00000369409 TOM1L1O75674 476 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 NDUFA10O95299 355 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 PLEKP08567 350 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 C6orf222P0C671 652 aaPredicted RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 DLATP10515 647 aaKnown RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 ELNP15502 786 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 PTPN14Q15678 1187 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 ZBTB41Q5SVQ8 909 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 SFMBT2Q5VUG0 894 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 NFRKBQ6P4R8 1299 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 USP37Q86T82 979 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 POP1Q99575 1024 aaKnown RBP18.25■□□□□ 0.51
PHGDH-202ENST00000369409 NFKBIZQ9BYH8 718 aa18.25■□□□□ 0.51
PHGDH-202ENST00000369409 TMEM117Q9H0C3 514 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms