RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 CARMIL3Q8ND23 1372 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 FAM187AA6NFU0 413 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 RNF113AO15541 343 aaKnown RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 RAD51CO43502 376 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 RHOBTB1O94844 696 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CASP5P51878 434 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 PABPC4Q13310 644 aaKnown RBP eCLIP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 TRMT5Q32P41 509 aaKnown RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 IYDQ6PHW0 289 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 RNF19BQ6ZMZ0 732 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 SIX6OS1Q8N1H7 587 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ACAP3Q96P50 834 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 SYT15Q9BQS2 421 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 GRIP2Q9C0E4 1043 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 TBC1D7Q9P0N9 293 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ZBTB1Q9Y2K1 713 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 RNF17Q9BXT8 1623 aaKnown RBP11.06□□□□□ -0.64
PRDM1-201ENST00000369089 A0A1B0GVG6 124 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DLGAP3O95886 979 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 SGO2Q562F6 1265 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 MIGA2Q7L4E1 593 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DNAJC10Q8IXB1 793 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 SNX25Q9H3E2 840 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 EHMT1Q9H9B1 1298 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 DIABLOQ9NR28 239 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 ANKFY1Q9P2R3 1169 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 TUBE1Q9UJT0 475 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CAPN11Q9UMQ6 739 aa11.06□□□□□ -0.64
PRDM1-201ENST00000369089 CLASP1Q7Z460 1538 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 LMTK3Q96Q04 1460 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ADCY9O60503 1353 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 LGALS16A8MUM7 142 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 SNX3O60493 162 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FAM58BPP0C7Q3 252 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 PHKG2P15735 406 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 KRR1Q13601 381 aaKnown RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FLOT2Q14254 428 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 PARP10Q53GL7 1025 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 RSBN1LQ6PCB5 846 aaPredicted RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 DTHD1Q6ZMT9 781 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 SMYD4Q8IYR2 804 aaPredicted RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 MKL1Q969V6 931 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 NSMCE3Q96MG7 304 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 TMEM94Q12767 1356 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FAM25AB3EWG3 89 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FAM25CB3EWG5 89 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FAM25GB3EWG6 89 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 SEMA3DO95025 777 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 RPL13P26373 211 aaKnown RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 MAN1A1P33908 653 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ITGADQ13349 1161 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ZNF174Q15697 407 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 QPCTQ16769 361 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 C10orf76Q5T2E6 689 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ERMARDQ5T6L9 678 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 NEK10Q6ZWH5 1172 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ENGASEQ8NFI3 743 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 HPS1Q92902 700 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 CCDC124Q96CT7 223 aaKnown RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 VMP1Q96GC9 406 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ROPN1BQ9BZX4 212 aaPredicted RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ROPN1Q9HAT0 212 aaPredicted RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 CYLDQ9NQC7 956 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 A2ML1A8K2U0 1454 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 AFF2P51816 1311 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 KLHL41O60662 606 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 PGM3O95394 542 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 TNNI3KQ59H18 835 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 LRRC49Q8IUZ0 686 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 NOSTRINQ8IVI9 506 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 PALM2Q8IXS6 379 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ASAP3Q8TDY4 903 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 SSH3Q8TE77 659 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 DCUN1D5Q9BTE7 237 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 TRIM39Q9HCM9 518 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 GTF3C4Q9UKN8 822 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 FPGT-TNNI3KV9GXZ4 949 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 CCDC130P13994 396 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 RESP18Q5W5W9 173 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 SDR16C5Q8N3Y7 309 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 EME1Q96AY2 570 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 MS4A14Q96JA4 679 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 CNOT6LQ96LI5 555 aaKnown RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 CEP19Q96LK0 163 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 LSM14BQ9BX40 385 aaKnown RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 DDX25Q9UHL0 483 aaKnown RBP11.05□□□□□ -0.64
PRDM1-201ENST00000369089 PTPN22Q9Y2R2 807 aa11.05□□□□□ -0.64
PRDM1-201ENST00000369089 NOP56O00567 594 aaKnown RBP11.04□□□□□ -0.64
PRDM1-201ENST00000369089 TRMUO75648 421 aaKnown RBP11.04□□□□□ -0.64
PRDM1-201ENST00000369089 FGGP02679 453 aa11.04□□□□□ -0.64
PRDM1-201ENST00000369089 PRKACBP22694 351 aa11.04□□□□□ -0.64
PRDM1-201ENST00000369089 NR1H2P55055 460 aa11.04□□□□□ -0.64
PRDM1-201ENST00000369089 LRRC63Q05C16 580 aa11.04□□□□□ -0.64
PRDM1-201ENST00000369089 CYP4F22Q6NT55 531 aa11.04□□□□□ -0.64
PRDM1-201ENST00000369089 CDR2LQ86X02 465 aaPredicted RBP11.04□□□□□ -0.64
PRDM1-201ENST00000369089 GRAMD1CQ8IYS0 662 aa11.04□□□□□ -0.64
PRDM1-201ENST00000369089 AK9Q5TCS8 1911 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms