RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 CRIPAKQ8N1N5 446 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 TMEM161BQ8NDZ6 487 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 HVCN1Q96D96 273 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.19
EFNA1-201ENST00000368406 ZNF576Q9H609 170 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 C1orf112Q9NSG2 853 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.19
EFNA1-201ENST00000368406 MTMR10Q9NXD2 777 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 TMEM63CQ9P1W3 806 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 ARHGAP28Q9P2N2 729 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 MAN1B1Q9UKM7 699 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 EXOC7Q9UPT5 735 aa13.9□□□□□ -0.19
EFNA1-201ENST00000368406 PIN4Q9Y237 131 aaKnown RBP13.9□□□□□ -0.19
EFNA1-201ENST00000368406 UBE4BO95155 1302 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 RBAK-RBAKDNI3L0D1 243 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 IBSPP21815 317 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-201ENST00000368406 LIG4P49917 911 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 PCBP1Q15365 356 aaKnown RBP eCLIP13.89□□□□□ -0.193e-6■■□□□ 12.4
EFNA1-201ENST00000368406 SLC24A5Q71RS6 500 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 Q7L0L9 218 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 ZNF720Q7Z2F6 126 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-201ENST00000368406 IFNLR1Q8IU57 520 aaPredicted RBP13.89□□□□□ -0.19
EFNA1-201ENST00000368406 NELFCDQ8IXH7 590 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 LINC01599Q8WXQ3 324 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 ACCSQ96QU6 501 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 MRPL4Q9BYD3 311 aaKnown RBP13.89□□□□□ -0.19
EFNA1-201ENST00000368406 NKX2-4Q9H2Z4 354 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 TMEM134Q9H6X4 195 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 MINDY3Q9H8M7 445 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 CHST12Q9NRB3 414 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 TBX20Q9UMR3 447 aa13.89□□□□□ -0.19
EFNA1-201ENST00000368406 COL6A3P12111 3177 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 HNRNPDLO14979 420 aaKnown RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 EIF3DO15371 548 aaKnown RBP eCLIP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 PRPF6O94906 941 aaKnown RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 LETM1O95202 739 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 CA3P07451 260 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 ZSCAN20P17040 1043 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 CASP5P51878 434 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 FAM189BP81408 668 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 STK4Q13043 487 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 DSC3Q14574 896 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 ZNF658Q5TYW1 1059 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 APBB1IPQ7Z5R6 666 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 SMYD4Q8IYR2 804 aaPredicted RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 TRIML1Q8N9V2 468 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 PRIMPOLQ96LW4 560 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 ADAM2Q99965 735 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 NTPCRQ9BSD7 190 aaKnown RBP13.88□□□□□ -0.19
EFNA1-201ENST00000368406 FGFBP2Q9BYJ0 223 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 CCDC113Q9H0I3 377 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 ANKFY1Q9P2R3 1169 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 GDAQ9Y2T3 454 aa13.88□□□□□ -0.19
EFNA1-201ENST00000368406 CNTNAP2Q9UHC6 1331 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TRANK1O15050 2925 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 C9IYK1 514 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 MGEA5O60502 916 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TSPAN1O60635 241 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 STAG3L1P0CL83 205 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 SARSP49591 514 aaKnown RBP13.87□□□□□ -0.19
EFNA1-201ENST00000368406 GTF2BQ00403 316 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 EHHADHQ08426 723 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 PPP2R2DQ66LE6 453 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TWF2Q6IBS0 349 aaKnown RBP13.87□□□□□ -0.19
EFNA1-201ENST00000368406 NOTUMQ6P988 496 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 NPAS4Q8IUM7 802 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 KIAA0895Q8NCT3 520 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 GLIS3Q8NEA6 775 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 SPATA20Q8TB22 786 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 SP7Q8TDD2 431 aaPredicted RBP13.87□□□□□ -0.19
EFNA1-201ENST00000368406 CPB2Q96IY4 423 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 ADPGKQ9BRR6 497 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TCHPQ9BT92 498 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TRAIPQ9BWF2 469 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TRIM6Q9C030 488 aaPredicted RBP13.87□□□□□ -0.19
EFNA1-201ENST00000368406 ST6GALNAC4Q9H4F1 302 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 TMEM206Q9H813 350 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 AGPAT5Q9NUQ2 364 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 MAPK8IP1Q9UQF2 711 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 MYO9BQ13459 2157 aa13.87□□□□□ -0.19
EFNA1-201ENST00000368406 ACKR2O00590 384 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 N4BP3O15049 544 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 B4GALT5O43286 388 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 DGKIO75912 1065 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 UPP2O95045 317 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 HARSP12081 509 aaKnown RBP13.86□□□□□ -0.19
EFNA1-201ENST00000368406 AXLP30530 894 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 TAP1Q03518 808 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 MORC3Q14149 939 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 FAM187BQ17R55 369 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 ATF7IP2Q5U623 682 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 FAM117BQ6P1L5 589 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 PPP4R3CPQ6ZMV5 832 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 HS2ST1Q7LGA3 356 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 MAP4K3Q8IVH8 894 aa13.86□□□□□ -0.19
EFNA1-201ENST00000368406 NOC3LQ8WTT2 800 aaKnown RBP13.86□□□□□ -0.19
EFNA1-201ENST00000368406 FIZ1Q96SL8 496 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms